Query= MSMg01no371_h04.b1 MSMg01no371_h04.b1 CHROMAT_FILE:
MSMg01no371_h04.b1 PHD_FILE: MSMg01no371_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:53 2005
(468 letters)
>mm_chr11_42255737_42256604
Length = 868
Score = 702 bits (363), Expect = 0.0
Identities = 366/367 (99%)
Strand = Plus / Minus
Query: 102 atgttttaatagatgctatttgtagctatattataatatatagaaactttaataagcctt 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 atgttttaatagatgctatttgtagctatattataatatatagaaactttaataagcctt 809
Query: 162 gcatgtaattaatttacttaatttggagaatcatcttttgaagttcataccatacttgtt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gcatgtaattaatttacttaatttggagaatcatcttttgaagttcataccatacttgtt 749
Query: 222 ctcatacaactggtaagaaaactgatagtctaataaattaattaattggaacaatgctac 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctcatacaactggtaagaaaactgatagtctaataaattaattaattggaacaatgctac 689
Query: 282 atagctagtatacggcagaggaaaagattctataggccaatatttaagggctgtgctttg 341
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atagctagtatacagcagaggaaaagattctataggccaatatttaagggctgtgctttg 629
Query: 342 ttgcccaatgtttaaaaaaaaaatcaaaggaaaagcatccactcttcaaaaattttcttg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttgcccaatgtttaaaaaaaaaatcaaaggaaaagcatccactcttcaaaaattttcttg 569
Query: 402 ccttcatttaagaaataaaattgacttctaatctttgtaaaagtaaccacaaaatgtatt 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ccttcatttaagaaataaaattgacttctaatctttgtaaaagtaaccacaaaatgtatt 509
Query: 462 taattct 468
|||||||
Sbjct: 508 taattct 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_h04.g1 MSMg01no371_h04.g1 CHROMAT_FILE:
MSMg01no371_h04.g1 PHD_FILE: MSMg01no371_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:54 2005
(428 letters)
>mm_chr11_42086638_42087465
Length = 828
Score = 665 bits (344), Expect = 0.0
Identities = 399/428 (93%), Gaps = 18/428 (4%)
Strand = Plus / Plus
Query: 1 attcccacatacacattactgtatagtgagcctggcggatgcccaaatacttgcactccc 60
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 attcccacatacacattagtgtatagtgagcctggcggatgtccaaatacttgcactccc 260
Query: 61 aaggccgagacagaggaattcctctgtcaagataataagtacactagtagaataagtgag 120
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aaggctgagacagaggaattcctctgtcaagataataagtacactagttgaataagtgag 320
Query: 121 ctctgggtttaagttagaagactcctacagtcaacctttgacctcctcacatacatacac 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgggtttaagttagaagacttctacagtcaacctttgacctcctcacatacatacac 380
Query: 181 atgtgcagttgaatacacacacacacaaggactcaaaaacttgggaacatgttcacatgt 240
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgtgcagttgaatactcacacacacaaggactcaaaaacttgggaacatgttcacatgt 440
Query: 241 acacacacacatacacatacatacacacacacacacacacacacacacacacacacacac 300
||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
Sbjct: 441 acacacacacatacacatacatacatacatacacacacacacacacacacaga------- 493
Query: 301 aaacacagtctcaaaaccatttaacaactgttcaggtataatgcagataaaaacaagcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 -------gtctcaaaaccatttaacaactgttcaggtataatgcagataaaaacaagcat 546
Query: 361 ccccatgaactattctctatgaccactgtgtatggaatagttggtgaaatgaatgcaggc 420
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 547 ccccatgaactactctctatgacc----tgtatggaatagttggtgaaatgaatgcaggc 602
Query: 421 taacactt 428
||||||||
Sbjct: 603 taacactt 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
