Query= MSMg01no371_o21.b1 MSMg01no371_o21.b1 CHROMAT_FILE:
MSMg01no371_o21.b1 PHD_FILE: MSMg01no371_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:33 2005
(475 letters)
>mm_chr11_102331185_102332055
Length = 871
Score = 847 bits (438), Expect = 0.0
Identities = 464/475 (97%), Gaps = 4/475 (0%)
Strand = Plus / Plus
Query: 1 ctgcctggctcactttgccatggcccacagttgtacagctcttacctcccccatgcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcctggctcactttgccatggcccacagttgtacagctcttacctcccccatgcagct 260
Query: 61 gaccatcctgctcttgaacgctgtgatgtggccaaggggagaggaaggagtaagcaagct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccatcctgctcttgaatgctgtgatgtggccaaggggagaggaaggagtaagcaagct 320
Query: 121 gttctcccctgataagaccagaggctgtcatcattttgagtaggacatttacccacttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctcccctgataagaccagaggctgtcatcattttgagtaggacatttacccacttcc 380
Query: 181 tcccccaagagcctttgggcagcctcagccggttgcatttgaccatcacgttcctcacat 240
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 381 tcccccatgagcctttgggcagcctcagccggttgcatttgaccatcactttcctcacgt 440
Query: 241 ctccatcttgaaccaagtcttagtgtggttacactggagccttcaatactgggcaaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ctccatcttgaaccaagtcttagtgtggttacactggagccttcaatactgggcagaggg 500
Query: 301 gtgatgaatgggtcttggcctaagtggggggagatggagctaaaaggacatcattctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgatgaatgggtcttggcctaagtggggggagatggagctaaaaggacatcattctgag 560
Query: 361 gtgcggcgttcacagtcctcgaggttgagcaccagctgttcaagtgaacagctttgctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgcggcgttcacagtcctcgaggttgagcaccagctgttcaagtgaacagctttgctcc 620
Query: 421 tttttggttgacagtatctacgtanataaataanatagattgaaagagagctaga 475
||||||||||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct: 621 tttttggttgacagtatctac----ataaataaaatagattgaaagatagctaga 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 871
Length adjustment: 10
Effective length of query: 465
Effective length of database: 861
Effective search space: 400365
Effective search space used: 400365
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_o21.g1 MSMg01no371_o21.g1 CHROMAT_FILE:
MSMg01no371_o21.g1 PHD_FILE: MSMg01no371_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:33 2005
(376 letters)
>mm_chr11_102535985_102536760
Length = 776
Score = 698 bits (361), Expect = 0.0
Identities = 369/373 (98%), Gaps = 4/373 (1%)
Strand = Plus / Minus
Query: 6 gaattctttctgcac--ttctgtaactaaaatcaaaactagaaaatgctgaagggttttc 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaattctttctgcaccgt--tgtaactaaaatcaaaactagaaaatgctgaagggttttc 519
Query: 64 ttggcaatacttctgaaataagttgctatttgaagttaaatttgtagatgaaagttgggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttggcaatacttctgaaataagttgctatttgaagttaaatttgtagatgaaagttgggg 459
Query: 124 aaaatctgaagagtggttagaaccttttgaagctgcacttaaatgactattcaatttcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aaaatctgaagagtggttagaaccttttgaagctgcacttaaatgactattcaatttcat 399
Query: 184 caagttaccttgatttcgataaggaataggaaggttattttttgtttgaacattcatcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caagttaccttgatttcgataaggaataggaaggttattttttgtttgaacattcatcca 339
Query: 244 agttggtctgtttaaactgatacctcctgaagatgttgctgaatttgagaataaattcac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agttggtctgtttaaactgatacctcctgaagatgttgctgaatttgagaataaattcac 279
Query: 304 tgatttaaaatattcagagtttagggggtcaggcttagcaaactgttgcttttcagagac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgatttaaaatattcagagtttagggggtcaggcttagcaaactgttgcttttcagagac 219
Query: 364 attagcaaaatca 376
|||||||||||||
Sbjct: 218 attagcaaaatca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
