Query= MSMg01no372_a17.b1 MSMg01no372_a17.b1 CHROMAT_FILE:
MSMg01no372_a17.b1 PHD_FILE: MSMg01no372_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:42 2005
(478 letters)
>mm_chr11_6320331_6321203
Length = 873
Score = 752 bits (389), Expect = 0.0
Identities = 442/469 (94%), Gaps = 19/469 (4%)
Strand = Plus / Minus
Query: 21 tctatggaagtttgtaaaaatctgacaaaaattgacatgctagtaatgtgattatggagt 80
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 463 tctatggaagtttgtaaaaatctgacaaaaattgacatgcta-----gtgattatggagt 409
Query: 81 tgttgaagggatgttttaacattctaaccctagttagatgtaactttaagacattttaag 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tgttgaagggatgttttaacattctaaccctagttagatgtaactttaagacattttaag 349
Query: 141 aacaatggaatgtacctgaaatattggagctggcaagatgactcagtgggtcaccaacct 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aacaatggaatgtacctgaaatattggagctggcaagatgactcagtgggtcaccaacct 289
Query: 201 tgaggtcaaatcctggtaaacaaattctgagtcatcctagtatctccagtcatatcccca 260
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 288 tgaggtcaaatcctggtaaacaaattctgagtcatcctagtatctccactcatatcccca 229
Query: 261 tcccccac----ta-----taaa--gcatcttaggagctagagggctcagtcattagcac 309
|||||||| || |||| |||||||||||||||| |||||||||| ||||
Sbjct: 228 tcccccacagaatacaaactaaaaagcatcttaggagctagtcggctcagtca---gcac 172
Query: 310 ttgcaaaggctgagctcaggtctcaatgcccatcaagtggcttccagccatctttagctg 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttgcaaaggctgagctcaggtctcaatgcccatcaagtggcttccagccatctttagctt 112
Query: 370 caaactctgaagctaccagctcccatagacaacacatcccaaaacatacagccaagatta 429
|| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 111 catactgtgaagctaccagctcccattgacaacacatcccaaaacatacagccaagatta 52
Query: 430 acttgagtgtttcaccttcatgtatccatgcttgtgcaccaaaagaggg 478
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 51 acttgagtgcttcaccttcatgtatccatgcttgtgcaccaaaagaggg 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 873
Length adjustment: 10
Effective length of query: 468
Effective length of database: 863
Effective search space: 403884
Effective search space used: 403884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_a17.g1 MSMg01no372_a17.g1 CHROMAT_FILE:
MSMg01no372_a17.g1 PHD_FILE: MSMg01no372_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:43 2005
(454 letters)
>mm_chr11_6092596_6093449
Length = 854
Score = 862 bits (446), Expect = 0.0
Identities = 452/454 (99%)
Strand = Plus / Plus
Query: 1 acactgagttccgaaaggaggtccctgaagcaccaggatggaaggcaatctggctcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acactgagttccgaaaggaggtccctgaagcaccaggatggaaggcaatctggctcacta 260
Query: 61 aggtgtttgagtgctgcttgagaataggagaataagacacaggcaagaacaaaggaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgtttgagtgctgcttgagaataggagaataagacacaggcaagaacaaaggaatgt 320
Query: 121 gacgagacacaggaagatggctgtctgcaaaccactgatagaagccttcaaacaaacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacgagacacaggaagatggctgtctgcaaaccactgatagaagccttcaaacaaacaac 380
Query: 181 ccagatcatactttaatctggggtttccagcctccagaactattaagaaatgaatttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagatcatactttaatctggggtttccagcctccagaactattaagaaatgaatttcta 440
Query: 241 tagttaaccactgcccaccaaaacagagctgatatttttttacaaaccacacaaaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagttaaccactgcccaccaaaacagagctgatatttttttacaaaccacacaaaacaaa 500
Query: 301 aaccactcataggcaaacttaagcacagcagagaggaggacactgcaggagatgctccta 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 aaccactcataggcaaacttaagcacagcagagaggacgacactgcaggagatgctccta 560
Query: 361 cctggggagcacaggagggtccttagggccttcagcggcactgctaactgttcctggagc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 cctggggagcacaggagggtccttagggccttcagcagcactgctaactgttcctggagc 620
Query: 421 ttccgccttctccaggccatgggtcactgtgtgc 454
||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccgccttctccaggccatgggtcactgtgtgc 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
