Query= MSMg01no372_g15.b1 MSMg01no372_g15.b1 CHROMAT_FILE:
MSMg01no372_g15.b1 PHD_FILE: MSMg01no372_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:09 2005
(432 letters)
>mm_chr11_106270665_106271496
Length = 832
Score = 719 bits (372), Expect = 0.0
Identities = 419/442 (94%), Gaps = 15/442 (3%)
Strand = Plus / Plus
Query: 1 cgtggtggcactcgcctttaattccagcacttgggaggcagaggcaggcagatttctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgtggtggcactcgcctttaattccagcacttgggaggcagaggcaggcagatttctgag 247
Query: 61 tttgaggtcagcctggtctacaaagtgagttccaggacagccagggctacagagaaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttgaggtcagcctggtctacaaagtgagttccaggacagccagggctacagagaaaccc 307
Query: 121 tgtcaaataaataa---ataaataaataaa--aat---------aaaaattcacttaagc 166
|||||| ||||||| || ||| ||| || ||| ||||||||||||||||
Sbjct: 308 tgtcaa-taaataagcaattaattaattaattaattaattaattaaaaattcacttaagc 366
Query: 167 cagatgggaagatgggaaacttccctctggccaatagcagttcacagccttttatctaga 226
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 367 cagatgggaagatgggaaacttccctctggccaatagcagttcagagccttttatccaga 426
Query: 227 gatcagtaggtaggaggaatccagggtataaagaacagtgagccctcaggaatccgggaa 286
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 427 gatcagtaggtaggaggaatccagggaagaaagaacagtgagccctcaggaatccgggaa 486
Query: 287 gagcatgcttgctctgtgttccaggtattgctcccagatacagtggggaactatttaccc 346
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 487 gagcatgcttgctctgtgttccaggtattgctcccagatacaatggggaactatttaccc 546
Query: 347 tcatcatcctgctccagagaggggctggtgccggccctggaggcagagctgctggggtgg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcatcatcctgctccagagaggggctggtgccggccctggaggcagagctgctggggtgg 606
Query: 407 agggagtggttggaggctctgg 428
||||||||||||||||||||||
Sbjct: 607 agggagtggttggaggctctgg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_g15.g1 MSMg01no372_g15.g1 CHROMAT_FILE:
MSMg01no372_g15.g1 PHD_FILE: MSMg01no372_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:09 2005
(232 letters)
>mm_chr11_106441483_106442114
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Minus
Query: 1 agaccctagaggtttaaccaggtggagagggagagatatctgggcttaacagggctgttg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 432 agaccctggaggtttaaccaggtggagagggagagatatctgggcttaacagggccgttg 373
Query: 61 gcttcctgtctagaattctctttttctgggattatatggactaaggcagcttggagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcttcctgtctagaattctctttttctgggattatatggactaaggcagcttggagaatt 313
Query: 121 aaggaaggtagcactgcagataaccatttggcaaattccatgatggacaagagtgagtac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggaaggtagcactgcagataaccatttggcaaattccatgatggacaagagtgagtaa 253
Query: 181 gtttggggtggggcggggaggggtggtcagaatgaggtgattgatgggttgt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtttggggtggggcggggaggggtggtcagaatgaggtgattgatgggttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
