Query= MSMg01no373_l15.b1 MSMg01no373_l15.b1 CHROMAT_FILE:
MSMg01no373_l15.b1 PHD_FILE: MSMg01no373_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:45 2005
(529 letters)
>mm_chr11_8723533_8724461
Length = 929
Score = 942 bits (487), Expect = 0.0
Identities = 514/523 (98%), Gaps = 2/523 (0%)
Strand = Plus / Plus
Query: 8 gaattcatgaactcttctcaatgatattcctaaatgtaaatggccttagctctctaaata 67
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatgaacttttctcaatgatattcctaaatgtaaatggccttagctctctaaata 267
Query: 68 tatttatacataatcatatccaggatttaattagaaatgtaaacccttaaattgtaggtc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatttatacataatcatatccaggatttaattagaaatgtaaacccttaaattgtaggtc 327
Query: 128 tatatacattctaaaaccctgcattttacctcttaactatgcccaatttagaaagttgta 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tatatacattctaaaaccctgcattttacctcttaactatgcccaatttagaaagttgta 387
Query: 188 taccgtggggaatagtaaaaatgtatttaatatgtctctgtttttttctttttatttgag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 taccgtggggaatagtaaaaatgtatttaatatgtctctgtttttttctttttatttgag 447
Query: 248 atgttaaaaaggaactgatttgtggtaggaacatgctttgctttggagctacaggttagg 307
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 448 atgttaaaaaggaactgatttgtggtaggaacatgcaaggctttggagctacaggttagg 507
Query: 308 aaagatatgggatgctgtaagcagagagtaacaagccattctgctgagagtgacaaacaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aaagatatgggatgctgtaagcagagagtaacaagccattctgctgagagtgacaaacaa 567
Query: 368 tgttggcattgtgggaatgaaggctcatggggcttcagagaggacatgaagaccctactg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgttggcattgtgggaatgaaggctcatggggcttcagagaggacatgaagaccctactg 627
Query: 428 acaattgaaagaggggccactgggttacactctggcaaagaatctagctctttacttctt 487
|||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 628 acaactgaaagaggggctactgggttacactctggcaaagaatctagctctctacttctt 687
Query: 488 gtgttctgacatttgaagatgacttncaaa-gtacccgatgga 529
||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 688 gtgttctgacatttgaagatgactt-caaaagtacccgatgga 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_l15.g1 MSMg01no373_l15.g1 CHROMAT_FILE:
MSMg01no373_l15.g1 PHD_FILE: MSMg01no373_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:45 2005
(480 letters)
>mm_chr11_8873366_8874245
Length = 880
Score = 868 bits (449), Expect = 0.0
Identities = 473/481 (98%), Gaps = 2/481 (0%)
Strand = Plus / Minus
Query: 1 agacctcagcctgcctgcctgtgtggcttaggggataagcacagaacaggcaaaggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agacctcagcctgcctgcctgtgtggcttaggggataagcacagaacaggcaaaggaggg 621
Query: 61 aaatgtggggaccctcgcatgtccacaggaatgttctcctgccttgaagggctcccatct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 aaatgtggggaccctcgcatgtccacaggagtgttctcctgccttgaagggctcccatct 561
Query: 121 ctattcacatttctagttgcctaagtgcccatcatcagggtcctcctgcaacagtttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctattcacatttctagttgcctaagtgcccatcatcagggtcctcctgcaacagtttcca 501
Query: 181 gcaagccagtgatggaagtcctgtgttcttgggagccagaggctcagaagtacagacttt 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcaagccagtgaaggaagtcctgtgttcttgggagccagaggctcagaagtacagacttt 441
Query: 241 ccagcccccagctcccagtacaaggagctacgcgtggggaggggaaactggtggctgtgg 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 ccagcccccagctcccagtacaaggagctacacgtggggaggggaaactggtggctgtgg 381
Query: 301 gtcaggatagcattgtataaaaacagcaggca-gtgattcatgaaaaagactgattttgg 359
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 380 gtcaggatagcattgtataaaaacagcagg-aggtgattcatgaaaaagactgattttgg 322
Query: 360 ctcatggtatcagtgatgtagggacaatgtcttttacctgtatttctgtaactagattag 419
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatggtctcagtgatgtggggacaatgtcttttacctgtatttctgtaactagattag 262
Query: 420 ttgcactccagttgccaacctcagcatccagggtgctgatcccagtttctatgcagctgg 479
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcactccacttgccaacctcagcatccagggtgctgatcccagtttctatgcagctgg 202
Query: 480 c 480
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
