Query= MSMg01no374_a16.b1 MSMg01no374_a16.b1 CHROMAT_FILE:
MSMg01no374_a16.b1 PHD_FILE: MSMg01no374_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:08 2005
(522 letters)
>mm_chr11_85204368_85205289
Length = 922
Score = 1002 bits (518), Expect = 0.0
Identities = 521/522 (99%)
Strand = Plus / Minus
Query: 1 tcctggccaccacagtaacacaagagaaagttggacataatgatacacaccaataaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tcctggccaccacagtaacacaagagaaagttggacataatgatacacaccaataaccca 807
Query: 61 gcacttgaatgctgaaacctttgaaattacagtttcaagggcaacctgggctgtggaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gcacttgaatgctgaaacctttgaaattacagtttcaagggcaacctgggctgtggaaca 747
Query: 121 aaatcttgtctcaaaaaacgaaaaccaaacaaaggcagctgggctgatgagcattactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aaatcttgtctcaaaaaacgaaaaccaaacaaaggcagctgggctgatgagcattactgt 687
Query: 181 gatcttactcagaagacccaagtcttgtgtttcttggtcacaggttcaggctctgcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gatcttactcagaagacccaagtcttgtgtttcttggtcacaggttcaggctctgcctgc 627
Query: 241 tggactatacagagtggcatcaaaaatcaccaaggcgacttagtgagaacctatctcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tggactatacagagtggcatcaaaaatcaccaaggcgacttagtgagaacctatctcaaa 567
Query: 301 aacaacattgttaataaacagtgcgaggatacagcgcagtgtggggatgcttatgtaacg 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 566 aacaacattgttaataaacagtgcgaggatacagcgcagtgtggggatgattatgtaacg 507
Query: 361 tgaggccctaggatcaatatctaattccaccaaacaatcgtacaaacaaatcaagaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgaggccctaggatcaatatctaattccaccaaacaatcgtacaaacaaatcaagaaaaa 447
Query: 421 ttatataagaattcactaattcttccagtggactacctgccaggccaccatgatgtcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttatataagaattcactaattcttccagtggactacctgccaggccaccatgatgtcatc 387
Query: 481 taatttacagcaatctataccactttatttgtgctattttac 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taatttacagcaatctataccactttatttgtgctattttac 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_a16.g1 MSMg01no374_a16.g1 CHROMAT_FILE:
MSMg01no374_a16.g1 PHD_FILE: MSMg01no374_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:08 2005
(429 letters)
>mm_chr11_85029789_85030618
Length = 830
Score = 774 bits (400), Expect = 0.0
Identities = 422/430 (98%), Gaps = 3/430 (0%)
Strand = Plus / Plus
Query: 1 actgccgagttgacacaagcgtccctgttggtaaagctgtaataataataaaaaaaaaag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 203 actgccgagctgacacaagcgtccctgttggtaaagctgtaataataataaaaaaaa--g 260
Query: 61 aaaaataattatttcaaacgttttaactttcaactttgtgatagaaaaaaatggatcata 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 aaaaataactatttcaaacgttttaactttcaactttgtgatagaaaaaaatggatccta 320
Query: 121 ataaaggaattattagcccggttccccgaatcggcaacgctgcgcccctctgcccggccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaaggaattattagcccggttccccgaatcggcaacgctgcgcccctctgcccggccc 380
Query: 181 cactccgggcctcaggccccccggacaccgagccgccgccacttcagatgcagacgccac 240
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 381 cactccgggcctcaggccccccggacgccgagccgccaccacttcagatgcagacgccac 440
Query: 241 cg-cgagcctccagcagcctgccccgcccggcagcgagagttgtcttccaactcccgagc 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cggcgagcctccagcagcctgccccgcccggcagcgagagttgtcttccaactcccgagc 500
Query: 300 aaatttttcagaacataaaacaagaatataatcgttaccagagatggagacatttagaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatttttcagaacataaaacaagaatataatcgttaccagagatggagacatttagaag 560
Query: 360 ttgttctcagtcaaagcgaagcctatacttcagaaagtcagccttcctcctcggcactca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgttctcagtcaaagcgaagcctatacttcagaaagtcagccttcctcctcggcactca 620
Query: 420 ctgcaccagg 429
||||||||||
Sbjct: 621 ctgcaccagg 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
