Query= MSMg01no374_g05.b1 MSMg01no374_g05.b1 CHROMAT_FILE:
MSMg01no374_g05.b1 PHD_FILE: MSMg01no374_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:36 2005
(279 letters)
>mm_chr11_106644840_106645516
Length = 677
Score = 480 bits (248), Expect = e-140
Identities = 252/254 (99%), Gaps = 2/254 (0%)
Strand = Plus / Minus
Query: 24 ctcctattctgattgctaccgatgtggcctccagagggctaggttagtacaaactcgaat 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ctcctattctgattgctaccgatgtggcctccagagggctaggttagtacaaactcgaat 416
Query: 84 tcatggcttggtttcccagaagatctccatgtagttttttttaaagaaagtttattgctt 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcatggcttggtttcccagaagatctccatgtagttttttttaaagaaagtttattgctt 356
Query: 144 tctttaacctctgcattttttctaagtttttttcacataaaggtgcagtctttgtggcaa 203
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tctttaac--ctgcattttttctaagtttttttcacataaaggtgcagtctttgtggcaa 298
Query: 204 ggcctaggcatgacaatcggaggactcgagggggatggaggactagtgatcggctggctg 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggcctaggcatgacaatcggaggactcgagggggatggaggactagtgatcggctggctg 238
Query: 264 cttccagtcgatta 277
||||||||||||||
Sbjct: 237 cttccagtcgatta 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 677
Length adjustment: 9
Effective length of query: 270
Effective length of database: 668
Effective search space: 180360
Effective search space used: 180360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no374_g05.g1 MSMg01no374_g05.g1 CHROMAT_FILE:
MSMg01no374_g05.g1 PHD_FILE: MSMg01no374_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:36 2005
(455 letters)
>mm_chr11_106471657_106472511
Length = 855
Score = 820 bits (424), Expect = 0.0
Identities = 439/444 (98%), Gaps = 2/444 (0%)
Strand = Plus / Plus
Query: 1 cttgaaggaaaaaaggaaaaggatggaaagaaaaccttgagggcagcattctgcaatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgaaggaaaaaaggaaaaggatggaaagaaaaccttgagggcagcattctgcaatgat 260
Query: 61 cttcctaacttgtgaattaatgaactcgtaagaaaaagggaaagacaagacgcctaacat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcctaatttgtgaattaatgaactcgtaagaaaaagggaaagacaagacgcctaacat 320
Query: 121 caagacactggccaacaaacataaagatgaatataattttgtattgaacctgacacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagacactggccaacaaacataaagatgaatataattttgtattgaacctgacacagaa 380
Query: 181 actggcctttgaagattcagtttgctatcaaagtaatctgaggtagaaagatttctccct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 actggcctttgaagattcagtttgctatcaaagtaatctgaggcagaaagatttctccct 440
Query: 241 ctctgtttttattgagtaacattctgtatatttctctct-cctacttcaagggcctcaga 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ctctgtttttattgagtaacattctgtatatttctctcttcctacttcaagggcctcaga 500
Query: 300 aaacaagagcttttgactttgatggaactccttcctcctccctccacccctaccacagcc 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 aaacaagagcttttgactttgatggaactccttcctcctcc-tccacccctaccacagcc 559
Query: 360 acaaagcctggcagattctagcacatcacagactctcaataaaaagttatcaaataaata 419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acaaagcctagcagattctagcacatcacagactctcaataaaaagttatcaaataaata 619
Query: 420 tttttgactctgggcaatgtcttt 443
||||||||||||||||||||||||
Sbjct: 620 tttttgactctgggcaatgtcttt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
