Query= MSMg01no374_h21.b1 MSMg01no374_h21.b1 CHROMAT_FILE:
MSMg01no374_h21.b1 PHD_FILE: MSMg01no374_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:44 2005
(409 letters)
>mm_chr5_38226948_38227756
Length = 809
Score = 775 bits (401), Expect = 0.0
Identities = 407/409 (99%)
Strand = Plus / Plus
Query: 1 ccctccccctctcctttccctaaaggtcagggtggcaggcaggataaggcagaggcgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctccccctctcctttccctaaaggtcagggtggcaggcaggataaggcagaggcgggg 260
Query: 61 caggtgggcctgtccggaccctgctgactcatgggagtgttaatgccactgcagtccgtt 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 caggtgggcctgtccagaccctgctgactcatgggagtgttaatgccactgcagaccgtt 320
Query: 121 gttgccgttgccagggagctgattaagatgtcacggaagattatgatgtcaggtgcagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgccgttgccagggagctgattaagatgtcacggaagattatgatgtcaggtgcagga 380
Query: 181 gtcaagctccaggggggtgactgctaggctgggaaggttaccctggcaacagagacagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaagctccaggggggtgactgctaggctgggaaggttaccctggcaacagagacagga 440
Query: 241 catccatgccgagtagggacatagtctagtaggaggggcagggggtccaggatgattgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catccatgccgagtagggacatagtctagtaggaggggcagggggtccaggatgattgtc 500
Query: 301 ctgggtaccaaaatctggcctttctgctccacagctgggtgggtgagcttggggggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgggtaccaaaatctggcctttctgctccacagctgggtgggtgagcttggggggaaag 560
Query: 361 tcttccatcttgaatatcttctctttctcccaaaatgggagaacaatcc 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttccatcttgaatatcttctctttctcccaaaatgggagaacaatcc 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_h21.g1 MSMg01no374_h21.g1 CHROMAT_FILE:
MSMg01no374_h21.g1 PHD_FILE: MSMg01no374_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:44 2005
(398 letters)
>mm_chr11_113504992_113505789
Length = 798
Score = 671 bits (347), Expect = 0.0
Identities = 386/399 (96%), Gaps = 2/399 (0%)
Strand = Plus / Minus
Query: 1 agatg-ttgtgtgtttactcttggtcggagatgccagtgagattaatgcttgctatcttg 59
||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 598 agatgtttg-gtgtttactcttggtcggagatgccagtgagattaatgctcgctatcttg 540
Query: 60 acatcttatctttatggcagcatttatcagtctgtgtctgttggaggtggcatttgtggt 119
|| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 539 acttcttatctttatggcagcatttatcagcctgtgtctgctggaggtggcatttgtggt 480
Query: 120 agaaggggctggcgactgacttggctgtttgcagatacctgagagattaccttccactaa 179
||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 479 agaagggcctggcaactgacttggctgtttgcagatacttgagagattaccttccactaa 420
Query: 180 cagctaggcaagcatctctggtgaaggaacctgcatgtctgggctccctgggtctgcggt 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 419 cagctaggcaagcatctctggtgaaggaacccgcatgtctgggctccctgggtctgcggt 360
Query: 240 cctccatttgtgttggctgcgaatgctcctgccgtgtgggctggcggtgtgctggatgct 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cctccatttgtgttggctgcgcatgctcctgccgtgtgggctggcggtgtgctggatgct 300
Query: 300 gcggggaacatttatttaggtctgactttggcttgtcctcttgcacctttccaccccagc 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcggggaacatttatttgggtctgactttggcttgtcctcttgcacctttccaccccagc 240
Query: 360 gtgtctttctgtgaatggcctcatagtcctacctctaaa 398
||||||||||||||||||||||| |||||||||||||||
Sbjct: 239 gtgtctttctgtgaatggcctcagagtcctacctctaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
