NNNTTTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTAAGTACTACCGTGGCTTTGGTCTGCTTTGGGAATAGGTG
CGCTATGAGGGCCGGTTAGCCAATGATGGGCAACCAAATCCCTGATCATA
CCAACCTAAGACGGGGTACATGCCAAAAGGCAGTGGTTATTGATAGTACA
CCACAGAGCCATGTTTGTGTGAATTATAACACAAACTAGCTACATGAAAC
TTCCGATGACAGAATTGAATGGTTCGAGAGGTTTGGAGATCCTAAGACAG
GCATAGCCACCAGCCACCATAATTCCCAGGGAGGGCTCTAGAGCATAAAT
AAATTTTAAGCCTCAGTCCAGCTTTATTTTTTTTTTAATATTAATAACAG
GGAGGAGATGTAGTCTCCCATAAGCCTGAAGCAGGCTAAGCCAGAACTTG
ACTTTGCTTGCCACTAAGAAGATTATCTAGTGTGGAGCCTTTTCCCTAGA
TCACTCTTGTTCTGCCACTGCTGCTGTTCCTCTTCAAGATACTGCTACCT
GCTGAGAGGCCCTGGAGCTATTCTGGAAACTATGCCCTATTCTGCACGCT
ATCACCTGCAGCTGGGTCCAGGTCCAAGGATGAATCCCCAGAAATGAATT
TCCTCCCCCCCCCCCTTTATAAAAGAGGGCTGAAAATATTGAACCTTGAT
CAAAACCCGGCCTAATTTCACCTTCCCTCGCCGCCAAATTTCCCCCCTTC
CAAATCCAAAAGGCCTCCCCCCTGGAACCCAAAAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXACTTTACTTTTTTTCTTTCAATGTATAAAGCACATAACAAATGGC
TTTTTATTCATTTGTTAATACATTTCATACATTAATTTTTAAAAATGTAT
CTACATCTTTTTATTTCCATAAATACAAAAATATTTATATTATTTCCTTT
AGTCATTCTTTAAAAGTATTGCTTACTCACATGTCTGGTGAACAGCTTTT
TGGTGTGTACATGTCTGAACATAAATGATTTCCTAGCTGAAGACTTGCAA
TTAAACATGAGAAATGAATTAGATATATAACAAACTTAATAATAAGGAAA
AATGAGTACTATAAATGAAGCTAATATGTTAATTATCAGGAATGAATGAG
AGGAGTGGAGGTAAAGCCAGTAAAACAATGTGTATATAACCTTAATTAGC
ATGCAAGTTCTTCATGGATTGAGTAAACTATGACTCTGAAGACATCAGAA
GAGTGTGGACAAGCTATTCAATACAGTGGGAAGAAAACAAACAATTATGA
CTGATTGTCCTGAAAGTTCAGGGGAGAGACCAGATCTTTTGGGTTCAAAC
ACATCTTTAAGAAACTGGCCTTAGGGTTAAACAAAGGGTAATAAAAAAGA
CCCGTTTCCGGGTTCTCCCCCTACAAAACTAGGCTTAGACCCGCTTTTTG
GGTATTTTCCCCCAAACTAACTTCTTTAGTTAATAGAAAGGGGCGGGGAT
TTATTTTTTTAG

Query= MSMg01no374_i21.g1 MSMg01no374_i21.g1 CHROMAT_FILE:
MSMg01no374_i21.g1 PHD_FILE: MSMg01no374_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:49 2005
         (437 letters)



>mm_chr11_27421895_27422729
          Length = 835

 Score =  760 bits (393), Expect = 0.0
 Identities = 428/447 (95%), Gaps = 14/447 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   actttactttttttctttcaatgtataaagcacataacaaatggctttttattcatttgt 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 193 actttactttttttctttcaacgtataaagcacataacaaatggctttttattcatttgt 252

                                                                       
Query: 61  taatacatttcatacattaatttttaaaaatgtatctacatctttttatttccataaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taatacatttcatacattaatttttaaaaatgtatctacatctttttatttccataaata 312

                                                                       
Query: 121 caaaaatatttatattatttcctttagtcattctttaa--------aagtattgcttact 172
           ||||||||||||||||||||||||||||||||||||||        ||||||||||||||
Sbjct: 313 caaaaatatttatattatttcctttagtcattctttaattctttaaaagtattgcttact 372

                                                                       
Query: 173 cacatgtctggtgaacagctttttggtgtgtacatgtctgaacataaatgatttcctagc 232
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cacatgtctggtgaacagccctttggtgtgtacatgtctgaacataaatgatttcctagc 432

                                                                       
Query: 233 tgaagac--ttgcaattaaacatgagaaatgaattagatatataacaaacttaataataa 290
           |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 433 tgaagacatttgcaattaaacatgagaaatgaattagatatataacaaatttaataataa 492

                                                                       
Query: 291 ggaaaaatgagtactataaatgaagctaatatgttaattatcaggaatgaatgagaggag 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||
Sbjct: 493 ggaaaaatgagtactataaatgaagctaatatgttaattatcaggaatga----gaggag 548

                                                                       
Query: 351 tggaggtaaagccagtaaaacaatgtgtatataaccttaattagcatgcaagttcttcat 410
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 549 tggaggtaaagccagtaaaacaatgtgtatataacctttattagcatgcaagttcttcat 608

                                      
Query: 411 ggattgagtaaactatgactctgaaga 437
           |||||||||||||||||||||||||||
Sbjct: 609 ggattgagtaaactatgactctgaaga 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 835
Length adjustment: 9
Effective length of query: 428
Effective length of database: 826
Effective search space:   353528
Effective search space used:   353528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)