Query= MSMg01no376_d07.b1 MSMg01no376_d07.b1 CHROMAT_FILE:
MSMg01no376_d07.b1 PHD_FILE: MSMg01no376_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:03 2005
(558 letters)
>mm_chr11_5413039_5413996
Length = 958
Score = 1007 bits (521), Expect = 0.0
Identities = 542/549 (98%)
Strand = Plus / Minus
Query: 8 ttcaagaccagtctgcgtagagtttcgtggcctcgagaaatggatggactctctttgctt 67
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttcaagaccagcctgggtagagtttcgtggcctcgagaaatggatggactctctttgctt 697
Query: 68 tactagggttatgggtttcatgttcttagtaccatgtgtagcaggcagacacagctcaac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tactagggttatgggtttcatgttcttagtaccatgtgtagcaggcagacacagctcaac 637
Query: 128 acagcctctacccgcctggggactctctcctgcttcaggtccagccctcagggaaaccct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 acagcctctacccgcctggggactctctcctgcttcaggtccagccctcagggaaaccct 577
Query: 188 tggtgatgctgtgggaaactatttcagggtgagctggagcaaggcaaaagttggtgagtt 247
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tggtgatgctatgggaaagtatttcagggtgagctggagcaaggcaaaagttggtgagtt 517
Query: 248 tattaggaaagacatgggtgtgactgctctagagggttttttacaatggctacatatatg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tattaggaaagacatgggtgtgactgctctagagggttttttacaatggctacatatatg 457
Query: 308 accctgagtggctttctcagccggagtcctcaaaggatgcacttcaccgcagagttgaaa 367
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 456 accctgagtggctttctcagccagagtcctcaaaggatgcacttcaccgcggagttgaaa 397
Query: 368 gagtaaggaaagtttacaattaaattagcagtaaagataagtgaaatcccacacggaggt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gagtaaggaaagtttacaattaaattagcagtaaagataagtgaaatcccacacggaggt 337
Query: 428 gttatatgataaatctggagttaaagcttacagaatatttgtgtaatacctttgaggccc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gttatatgataaatctggagttaaagcttacagaatatttgtgtaatacctttgaggccc 277
Query: 488 taagttggagaaacacaaagcggggagagagggggcagagaggaaccaggagctcagctg 547
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 276 taagttggagaaacacaaagcagggagagagggggcagagaggaaccaggagctcagctg 217
Query: 548 gtaaagggc 556
|||||||||
Sbjct: 216 gtaaagggc 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_d07.g1 MSMg01no376_d07.g1 CHROMAT_FILE:
MSMg01no376_d07.g1 PHD_FILE: MSMg01no376_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:03 2005
(525 letters)
>mm_chr11_5216967_5217891
Length = 925
Score = 926 bits (479), Expect = 0.0
Identities = 511/525 (97%), Gaps = 7/525 (1%)
Strand = Plus / Plus
Query: 1 tcttctagttacataaagagtatctgtgacctgttaactaaattcctatcactacaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttctagttacataaagagtatctgtgacctgttaactaaattcctatcactacaggga 260
Query: 61 atcctacaggggaggaaagaggtattctgaaggctgacaaggaatcaggaaagcaacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcctacaggggaggaaagaggtattctgaaggctgacaaggaatcaggaaagcaacact 320
Query: 121 aggataaaagcccaaataaagaatttcaatcctgggtaggcatggtggtacacaccttta 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 aggataaaagcccaaataaagaatttcaatcatgggtaggcatggtggtacacaccttta 380
Query: 181 atcccagtactcaggaggcagaggtggtcagatctctgtgagttcgaggccagtctggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 atcccagtactcaggaggcagaggtggtcagatctctgtgagttcgaggccagcctggtc 440
Query: 241 tacagaatgagttctaggacagccaggactattcagagaaaccctgtaccccaccacccc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tacagaatgagttctaggacagccaggactattcagagaaaccctgtacccc----cccc 496
Query: 301 gccccccaaaaaaaagattttcagtccctctatccctggaaaacaactggtccacatgcc 360
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 497 ---cccaaaaaaaaagattttcaatccctctatccctggaaaacaactggtccacatgcc 553
Query: 361 ctctgctgtatggtaagctcagacagatatgaagctgccagctctgagggctaggcttca 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 554 ctctgctgtatggtaagctcagacagataccaagctgccagctctgagggctaggcttca 613
Query: 421 ggcttggaatctaaaaccaggagctctgcatttattccagcctcagcttggagcaccttc 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggcttggaatttaaaaccaggagctctgcatttattccagcctcagcttggagcaccttc 673
Query: 481 caaatctctaaactgtaagttcttcttatcttctttcagctggga 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 caaatctctaaactgtaagttcttcttatcttctttcagctggga 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
