Query= MSMg01no376_d22.b1 MSMg01no376_d22.b1 CHROMAT_FILE:
MSMg01no376_d22.b1 PHD_FILE: MSMg01no376_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:06 2005
(469 letters)
>mm_chr11_53649493_53650361
Length = 869
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%)
Strand = Plus / Minus
Query: 4 ggaattcactctacagactgggctggcctcaaactcagagatctgctcacccaggattaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggaattcactctacagactgggctggcctcaaactcagagatctgctcacccaggattaa 691
Query: 64 aggcgtgtgccaccactactcaataataaatgtagagtttattccccttggtctccaccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aggcgtgtgccaccactactcaataataaatgtagagtttattccccttggtctccaccc 631
Query: 124 aactactgtatccttccccttggagcccacagctcctgccaggtgcccgttacagcagct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aactactgtatccttccccttggagcccacagctcctgccaggtgcccgttacagcagct 571
Query: 184 cccttacccacccctccctcacaccatcaccatcatgcagctacaggtcataactgcttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cccttacccacccctccctcacaccatcaccatcatgcagctacaggtcataactgcttc 511
Query: 244 ccatggaagagccccacttcagtccgctacctagttcctaccacctgactttgatgaggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccatggaagagccccacttcagtccgctacctagttcctaccacctgactttgatgaggc 451
Query: 304 gaggactctgtcatccccatctgaagacagcaatgccgaggctcagaggtttcactgcat 363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 450 gaggactctgtcatccccatctgaagacagcaatgccaaggctcagaggtttcacagcat 391
Query: 364 gtgtgagggagggcacatggctggcgaacagcagagcgggtctccatttcagctgttcca 423
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtgtgagggagggcacacggctggcgaacagcagagcgggtctccatttcagctgttcca 331
Query: 424 aagtgtgtgtgcttgtcattaggctagattacatcccacatactag 469
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aagtgtgtgtgcttgtcattaggctagattacatcccacatactag 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_d22.g1 MSMg01no376_d22.g1 CHROMAT_FILE:
MSMg01no376_d22.g1 PHD_FILE: MSMg01no376_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:06 2005
(441 letters)
>mm_chr11_53468709_53469549
Length = 841
Score = 837 bits (433), Expect = 0.0
Identities = 439/441 (99%), Gaps = 1/441 (0%)
Strand = Plus / Plus
Query: 1 ttagaaaactctcaaagacttgctcaggaaggggtttgagaaggcaaagctggcaactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagaaaactctcaaagacttgctcaggaaggggtttgagaaggcaaagctggcaactaa 260
Query: 61 ggtcatacaggagaggctgtgggcagagctttggaacaagcatttgagacacaccatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcatacaggagaggctgtgggcagagctttggaacaagcatttgagacacaccatgtt 320
Query: 121 agttaccttgcccacgataggtactccgccaaagatcacgaataattttgttgatttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttaccttgcccacgataggtactccgccaaagatcacgaataattttgttgatttctt 380
Query: 181 ccattttcatactgtgaaatttcataattgctctggaaaaaggaagtcagttttacttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattttcatactgtgaaatttcataattgctctggaaaaaggaagtcagttttacttaa 440
Query: 241 tacaatatgtactatttatatgaaagacataactatgtagtagtatatgctaaattatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacaatatgtactatttatatgaaagacataactatgtagtagtatatgctaaattatat 500
Query: 301 atgaatatgtatactaataatgataataatatcacagccctagtacttttttttt-aaag 359
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 501 atgaatatgtatactaataatgataataatatcactgccctagtacttttttttttaaag 560
Query: 360 atttatttatttattatatgtaagtacactgtagctgtcttcacacactccagaagaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttatttatttattatatgtaagtacactgtagctgtcttcacacactccagaagaggg 620
Query: 420 cgtcagatcttgttaggatgg 440
|||||||||||||||||||||
Sbjct: 621 cgtcagatcttgttaggatgg 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
