Query= MSMg01no376_e05.b1 MSMg01no376_e05.b1 CHROMAT_FILE:
MSMg01no376_e05.b1 PHD_FILE: MSMg01no376_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:07 2005
(524 letters)
>mm_chr11_38881826_38882750
Length = 925
Score = 1000 bits (517), Expect = 0.0
Identities = 520/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgaaag-atctatttgttgatgtcctttcttatgggttgctttagagtacctt 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgaaagtatctatttgttgatgtcctttcttatgggttgctttagagtacctt 264
Query: 64 ctacaagtgactatatatatatcatcatccgtttgctggccagtttgaaaaatatgtgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacaagtgactatatatatatcatcatccgtttgctggccagtttgaaaaatatgtgaa 324
Query: 124 ttactactactgttgttaaaatttgtatgtactatgtcatagttaacaagatttatggtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttactactactgttgttaaaatttgtatgtactatgtcatagttaacaagatttatggtt 384
Query: 184 tagatggaatgtcgtcataggagagagggatggcagacaatacatacagagcaaacaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagatggaatgtcgtcataggagagagggatggcagacaatacatacagagcaaacaaat 444
Query: 244 tctgaatttgtaaaggatattccagtatgaaggaagaagagggaagtagaaaatatatct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgaatttgtaaaggatattccagtatgaaggaagaagagggaagtagaaaatatatct 504
Query: 304 ccaattaaatatagaagacagttgtaaaaatactttcagacagcctgcaaaatcatttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccaattaaatatagaagacagttgtaaaaatactttcagacagcctgcaaaatcatttta 564
Query: 364 ggtgaagatttaaaagttgttattttctcctttggaaagatagttttaatagttttcctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtgaagatttaaaagttgttattttctcctttggaaagatagttttaatagttttcctt 624
Query: 424 taactgtttgaaaaggaacatttgcatgattgaaattgatttcattgaagattgaaagga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taactgtttgaaaaggaacatttgcatgattgaaattgatttcattgaagattgaaagga 684
Query: 484 aacagtggatgttataatcagctcatcatagaagctttgag 524
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aacagtggatgttataatcagctcatcatagaagctttgag 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e05.g1 MSMg01no376_e05.g1 CHROMAT_FILE:
MSMg01no376_e05.g1 PHD_FILE: MSMg01no376_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:07 2005
(474 letters)
>mm_chr11_39043857_39044733
Length = 877
Score = 845 bits (437), Expect = 0.0
Identities = 466/477 (97%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 1 cttctaaaccctggaatgtgtaaaatatccttttactgtttttgctgattgtaggggtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cttctaaaccctggaatgtgtaaaatatccttttactgtttttgctgattgtaggggtac 618
Query: 61 atctgtcaagtttgcttaaactcattggtcactcagctgagggaagttgatgttcatcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atctgtcaagtttgcttaaactcattggtcactcagctgagggaagttgatgttcatcga 558
Query: 121 gtctaaccaaacataaatacaaaagaagttcttaactggttgctcattttctatgtcttt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 557 gtctaaccaaacataaatacaatagaagttcttaactggttgctcattttctatgtcttt 498
Query: 181 gtgttttaattcatttttatctatttattttatggcaatataaattttcacacattctac 240
||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 497 gtggtttaattcatttttatctatttattttatgtcaatacaaattttcacacattctac 438
Query: 241 atgaaatggatatatctcagttcaatacagtgctcatctcaagcaaagtccatgtgttgt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgaaatggatatatttcagttcaatacagtgctcatctcaagcaaagtccatgtgttgt 378
Query: 301 aatctgacttctgcctaatgtccgtaaggcttttatattcttctcatatggcactctgta 360
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 377 aatctgacttctgcctaatgcccataaggcttttatattcttctcatatggcactctgta 318
Query: 361 tatttttggcactgtcttttatcaagaaatctaagtgatagaaa---tctcttattggaa 417
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 317 tatttttggcactgtcttttatcaagaaatctaagtgatagaaatcttctcttattggaa 258
Query: 418 aatgaaacataaagcaatagcaatgaaatttttgtagattctaaatggttcctttag 474
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aatgaaacataaaacaatagcaatgaaatttttgtagattctaaatggttcctttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 877
Length adjustment: 10
Effective length of query: 464
Effective length of database: 867
Effective search space: 402288
Effective search space used: 402288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
