NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCATGACATTCCTCGAAGCTGTTTTGGGCAGAAACCCAAAGAAGG
GTTTTAAGCAGGTCAGTTCATTATTTCTGGAGATGAATCTTGAAAAGCTG
TACATTTTGTAATGTGTAAATGTCACAGCCAAAATTTTACTACCATTAAG
GTATCAGTATAGGTTTTTAAGGGTACACAGATTAGTTAAGAATGAAATTC
TGCTCCTTTTTTGAGCTTGTGAAAGACAGCTGTCTTTTTTATAATGTTAA
TTTTTTATTAGATATTTTATTCATTTACACTTCTTTCTCTGTTTTGTTTT
GTTTTTTCAAGACAGAGTTTCTCTGTATAGCCCTGGCTGTACTGGAACTC
ACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCC
TCCCTAGTGCTGAGATTAAAGGCTTGCTCCACCATGCCCGGCTTCATTTA
CATTTCAAATGCTACTACCCTTCCCAGTTTCCACTCTGAAAATCCACTAT
ATGCCCATCCTACCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGCCTC
TGGCTTTCTCCTGTACTGGGGCATATAATCTTCTCAAGACCAAGGGCCTC
TCTTACCACCTTTTTAATGAGTTAATTTTATTTTATGTCTTAATTCCTTT
ATTTATTTTTACTAAAAATTTTCTTTATAAAC

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTGCATTCTATCCTCTGCAATAGT
TGCAGCTATTTAATCTTTTCAAGCTGCCATTTTTCACTTTCATTGTTCAC
TTTCAGAAATCATGAAGATATTTACTTATGTAATACTGACATCTGCCCTG
TGAAATCTGAAACAATCACACTTCCTTTGGCATATTGTTGTGTACATAAC
ATATTTATTCACAATTGAAACCAACTCCTGTGGGAAACAGGAAGGACCCT
TAAAAAAGGGAAGCTTATAAATATGTACTTATATTCATAATATATGTATA
TTTGGATCTAAATAGCTTATACAATTTATTTTGTGTGTTTTTTTTAATTG
AAAATGTTTTTTTTTATACAATATAGTGTCATAGTTGCTCATACTACAAC
CCCTCCTAGTTTCTTCCCACCTTCTTTTCCATGTGGATATATACATCCTC
TGTTTCTTTTTAGAAAACAAAGCTAAATCTAAGGAATAATAATAACATAA
GATTAAAAAAACAAACAAACAAATAGGAATAAGAAGACAAAGACNTGAGA
GAAAAAGAGCAAAAGAAGAAGCACAAGAAACATATATAGGCAGAGAAACA
CATACTTTCAGACACACGGGGATTCCGAAAAAACAGAACACCACAGGCTA
TAGTATATATGCCAAAGACTTGTAAAGTTTTTAAAAAAAAN

Query= MSMg01no376_m01.g1 MSMg01no376_m01.g1 CHROMAT_FILE:
MSMg01no376_m01.g1 PHD_FILE: MSMg01no376_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:43 2005
         (584 letters)



>mm_chr11_27699084_27700067
          Length = 984

 Score = 1056 bits (546), Expect = 0.0
 Identities = 573/583 (98%), Gaps = 5/583 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcattctatcctctgcaatagttgcagctatttaatcttttcaagctgccatttttcac 62
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 203 tgcattctatcctctgcaatagttgaagctatttaatcttttcaagctgccatttttcac 262

                                                                       
Query: 63  tttcattgttcactttcagaaatcatgaagatatttacttatgtaatactgacatctgcc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttcattgttcactttcagaaatcatgaagatatttacttatgtaatactgacatctgcc 322

                                                                       
Query: 123 ctgtgaaatctgaaacaatcacacttcctttggcatattgttgtgtacataacatattta 182
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 323 ctgtgaaatctgaaacaatcacacttcctttgacatattgttgtgtacataacatattta 382

                                                                       
Query: 183 ttcacaattgaaaccaactcctgtgggaaacaggaaggacccttaaaaaagggaagctta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttcacaattgaaaccaactcctgtgggaaacaggaaggacccttaaaaaagggaagctta 442

                                                                       
Query: 243 taaatatgtacttatattcataatatatgtatatttggatctaaatagcttatacaattt 302
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taaatatgtactcatattcataatatatgtatatttggatctaaatagcttatacaattt 502

                                                                       
Query: 303 attttgtgtgttttttttaattgaaaatgtttttttttatacaatatagtgtcatagttg 362
           ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 503 attttgtctgttttttt-aattgaaaatgtttttttt-atacaatatagtgtcatagttg 560

                                                                       
Query: 363 ctcatactacaacccctcctagtttcttcccaccttcttttccatgtggatatatacatc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcatactacaacccctcctagtttcttcccaccttcttttccatgtggatatatacatc 620

                                                                       
Query: 423 ctctgtttctttttagaaaacaaagctaaatctaaggaataataataacataagattaaa 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctgtttctttttagaaaacaaagctaaatctaaggaataataataacataagattaaa 680

                                                                       
Query: 483 aaaacaaacaaacaaataggaa-taagaagacaaagacntgagagaaaaagagcaaaaga 541
           ||||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 681 aaaa--aacaaacaaataggaaataagaagacaaagacatgagagaaaaagagcaaaaga 738

                                                      
Query: 542 agaagcacaagaaacatatataggcagagaaacacatactttc 584
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agaagcacaagaaacatatataggcagagaaacacatactttc 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)