Query= MSMg01no377_c07.b1 MSMg01no377_c07.b1 CHROMAT_FILE:
MSMg01no377_c07.b1 PHD_FILE: MSMg01no377_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:13 2005
(152 letters)
>mm_chr11_94261765_94262316
Length = 552
Score = 286 bits (148), Expect = 3e-82
Identities = 151/152 (99%)
Strand = Plus / Plus
Query: 1 gagcctcgttgcttttcctattacacctaattttacagctttaactaaagataaacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagcctcgttgcttttcctattacacctaattttacagctttaactaaagataaacctaa 260
Query: 61 tgtagaattatttttaatactggtgagtaatgcttttatagtcttagggttaggggtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagaattatttttaatactggtgagtaatgcttttatagtcttagggttaggggtgga 320
Query: 121 accagagggattgtctcataagacctcaaggg 152
|||||||||||||||||| |||||||||||||
Sbjct: 321 accagagggattgtctcaaaagacctcaaggg 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no377_c07.g1 MSMg01no377_c07.g1 CHROMAT_FILE:
MSMg01no377_c07.g1 PHD_FILE: MSMg01no377_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:14 2005
(363 letters)
>mm_chr11_94479958_94480721
Length = 764
Score = 629 bits (325), Expect = 0.0
Identities = 355/365 (97%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 1 acttctgcaacctctaggatggctcaccaagtgtgttactgatggtctcttctgtttgtg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acttctgcaacctccaggatggctcaccaagtgtgttactgatggtctcttctgtttgtg 368
Query: 61 gattcttgacatcttattcaaagacccctcaaaaaaagcacac-c-aatagcaaagcagc 118
|||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||
Sbjct: 367 gattcttgacatcttattcaaagacccc-aaaaaaaagcacacacaaatagcaaagcagc 309
Query: 119 aaggattcttttgtgggttcatgaataggacaagttggttggcttaggggcagaattcag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaggattcttttgtgggttcatgaataggacaagttggttggcttaggggcagaattcag 249
Query: 179 gtggttttctgtgttgatagataggttatggtcgcttttgttatgtcctgtggtggtttg 238
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 248 gtggttttctatgttgatagataggttatggtagcttttgttatgtcctgtggtggtttg 189
Query: 239 aatgggtatggcccccacaggcttatgtgtttgaatgcttggcccatagggtctggtacc 298
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 188 aatgggtatggcccctacaggcttatgtgtttgaatgcttggcccatagggtctggcacc 129
Query: 299 attagaaggtgtggagccttgttggaagaagtgtgtcattgtagagacagtctttgaaat 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 128 attagaaggtgtggagccttgttggaagaagtgtgtcattgtagagacagtctttgaagt 69
Query: 359 ctctt 363
|||||
Sbjct: 68 ctctt 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 764
Length adjustment: 9
Effective length of query: 354
Effective length of database: 755
Effective search space: 267270
Effective search space used: 267270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
