Query= MSMg01no378_a11.b1 MSMg01no378_a11.b1 CHROMAT_FILE:
MSMg01no378_a11.b1 PHD_FILE: MSMg01no378_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:25 2005
(530 letters)
>mm_chr11_16735991_16736921
Length = 931
Score = 990 bits (512), Expect = 0.0
Identities = 523/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcttctttt-acataattggagtctgtttccaggtcacattagataaggttat 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaattctgcttcttttaacataattggagtctgtttccaggtcacattagataaggttat 672
Query: 64 atcagtaagcatgaaccaccttgcaaattaaagtccatgagtaattgacacttaggaata 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 671 atcagtaagcatgaaccaccttgcaaattaaagtacatgagtaattgacacttaggaata 612
Query: 124 tttttgtttctagctgcaaacagttagaaagtgtggctgttggtgtgtatttttctacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttttgtttctagctgcaaacagttagaaagtgtggctgttggtgtgtatttttctacac 552
Query: 184 atgatctacagttacataaactgaaaagctctatcaatctatgattcctgggagatcata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atgatctacagttacataaactgaaaagctctatcaatctatgattcctgggagatcata 492
Query: 244 aagcttacagacccaagtctccattacatttatgaaatccatgggcaaaccagctatact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aagcttacagacccaagtctccattacatttatgaaatccatgggcaaaccagctatact 432
Query: 304 attcagcagaaagtcctggcaggttgttatatgagtggaatcagatgagagacagaggga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 attcagcagaaagtcctggcaggttgttatatgagtggaatcagatgagagacagaggga 372
Query: 364 ccatggaaaatggggatggcatgggcaaattccatgtagagaactgactggatcttcaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccatggaaaatggggatggcatgggcaaattccatgtagagaactgactggatcttcaga 312
Query: 424 gcactaacttgagtgtgtagagaggatctgggatggaaatgtgtgccagatgctccaaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcactaacttgagtgtgtagagaggatctgggatggaaatgtgtgccagatgctccaaca 252
Query: 484 gcccccgtatctccagaagacttctggaanaaccctggtttttagag 530
||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 251 gccccggtatctccagaagacttctggaaaaaccctggtttttagag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 931
Length adjustment: 10
Effective length of query: 520
Effective length of database: 921
Effective search space: 478920
Effective search space used: 478920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_a11.g1 MSMg01no378_a11.g1 CHROMAT_FILE:
MSMg01no378_a11.g1 PHD_FILE: MSMg01no378_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:25 2005
(520 letters)
>mm_chr11_16545325_16546244
Length = 920
Score = 990 bits (512), Expect = 0.0
Identities = 518/520 (99%)
Strand = Plus / Plus
Query: 1 atagccactatgcctcaagatctgcatgccaagatccaggccacaaacttttatttaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagccactatgcctcaagatctgcatgccaagatccaggccacaaacttttatttaccc 260
Query: 61 agcctgcagataaggatcactgatgagccttccaattctggattgtagttcagttcaaat 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcctgcagataaagatcactgatgagccttccaattctggattgtagttcagttcaaat 320
Query: 121 atagtcaggttgacaaccaggaaaagccactacaatatacatacatatatatttgagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagtcaggttgacaaccaggaaaagccactacaatatacatacatatatatttgagatt 380
Query: 181 aatatactgataaatatatatggaggccccattaatattaaagtatttgtaattaccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatactgataaatatatatggaggccccattaatattaaagtatttgtaattaccttt 440
Query: 241 atctcttctatagtctagctagcagtataaggtcagatttctttcctgttgtgaaaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctcttctatagtctagctagcagtataaggtcagatttctttcctgttgtgaaaatat 500
Query: 301 gttaatgataaaccttatcataaaggaggactttatgttccttagttcaaatccctattt 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gttaatgataaaccttatcataaaggatgactttatgttccttagttcaaatccctattt 560
Query: 361 gacatcaactcctctttatgtgtaatactgtaagactttcatgcctatatgctaatgaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacatcaactcctctttatgtgtaatactgtaagactttcatgcctatatgctaatgaca 620
Query: 421 aaatagcagaggtggacttaataggaaaccttgccctgagcctagaacagtctacatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatagcagaggtggacttaataggaaaccttgccctgagcctagaacagtctacatgat 680
Query: 481 acccagtgaaatgtgccaaggaagtctttgatgtccccag 520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acccagtgaaatgtgccaaggaagtctttgatgtccccag 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
