Query= MSMg01no379_g15.b1 MSMg01no379_g15.b1 CHROMAT_FILE:
MSMg01no379_g15.b1 PHD_FILE: MSMg01no379_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:11 2005
(675 letters)
>mm_chr11_91714197_91715269
Length = 1073
Score = 1162 bits (601), Expect = 0.0
Identities = 655/673 (97%), Gaps = 4/673 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaatgaattgtccttcatctcgtatgacctattcctgatttcataagataagca 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatgaattgtacttcatctcgtatgacctattcctgatttcataagataagca 263
Query: 64 acattctcctttttagataatatcacatctacagagtgtttggttttgcatgtgcacata 123
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 264 acattctcctttttagataatatcacatccacagagtgtttgggtttgcatgtgcacata 323
Query: 124 ctgaggggtagtgcataatccaaaccctacaggatgttgcactattgcatatttcttcag 183
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 ctgcggggtagtgcataatccaaaccctacaggatgttgcactatttcatatttcttcag 383
Query: 184 gatctattctgtcctctcctatattgcccctttcccttgccctcccattatttgctttca 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 gatctattctgtcctctcctatattgcccctttccctcgccctcccattatttgctttca 443
Query: 244 ttccagcagtactaccctggcatccagtgccatctcagctacttgaatacttacaataaa 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttccagcaatactaccctggcatccagtgccatctcagctacttgaatacttacaataaa 503
Query: 304 tgttttttttttcagatgcatggaacatattagttaatggagaaagaacaaaacaaagac 363
||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtcttttttt-cagatgcatgggacatattagttaatggagaaagaacaaaacaaagac 562
Query: 364 tctttcttttacaattggttcttcgatgaaagtgcagaacctctgcatcagggaacaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 563 tctttcttttacaattggttcttcgatgaaagtgcagaacctctgcatcagggaataaat 622
Query: 424 gaatgttcttagaatttttcataacataactaccatccttttaaaaaaaaagaaccatag 483
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 gaatgttcttagaatttttcataacataactaccatccttttaaaaaaaa-gaaccatag 681
Query: 484 ttctttttatttacccaa-agtcatagcagatgaagcttagatcaaggacagagctagat 542
|||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 682 ttctttttatttacccaaca-tcagagcaggtgaagcttagatcaaggacagagctagat 740
Query: 543 gaaattcctggtatgaacaaaaaggaaaaaataggcaaacaatcaactaagtcaaaaaca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaattcctggtatgaacaaaaaggaaaaaataggcaaacaatcaactaagtcaaaaaca 800
Query: 603 ttgtgtgatttgttggttttaagaatctagaacttcttgctggtattgactgtatggaaa 662
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 801 ttgtgtgatttgttggttttaagaatctagaacttcttgctggtgtcgactgtatggaaa 860
Query: 663 atgtttccaggaa 675
|||||||||||||
Sbjct: 861 atgtttccaggaa 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1073
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1063
Effective search space: 706895
Effective search space used: 706895
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_g15.g1 MSMg01no379_g15.g1 CHROMAT_FILE:
MSMg01no379_g15.g1 PHD_FILE: MSMg01no379_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:11 2005
(550 letters)
>mm_chr11_91867994_91868943
Length = 950
Score = 832 bits (430), Expect = 0.0
Identities = 478/494 (96%), Gaps = 2/494 (0%)
Strand = Plus / Minus
Query: 58 ttcttgagttctttgtatatattggatattagccctctatcggatgtaggatagctaaag 117
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 950 ttcttgagttctttgtatatattggatattagccctctatcagatgtaggatagctaaag 891
Query: 118 atcttttcccaatctgttgtttgctgttgtgtcctattgacagtgtcctttgccttacag 177
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 890 atcttttcccaatctgttgtttgctgttgtgtccttttgacagtgtcctttgccttacag 831
Query: 178 aagcttttcaattttatgagtttccatttgtcaattcttgatcttagagcataagccatt 237
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 830 aagcttttcaattttatgagattccatttgtcaattcttgatcttagagcctaaggcatt 771
Query: 238 ggtgttctcttcagaaattgaagagagatatgaattgaggctcagcatgtctctctgcaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ggtgttctcttcagaaattgaagagagatatgaattgaggctcagcatgtctctctgcaa 711
Query: 298 atggaatttcttatactcatctcttactgctggtaattgtttatttctttgtggatgctt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atggaatttcttatactcatctcttactgctggtaattgtttatttctttgtggatgctt 651
Query: 358 agagtatggcaatcatatttattgtgggtcttgagaaa-gcagaacacttactcgttaga 416
|||||||||||||||||||||||||||||||||| ||| ||||||| |||| | ||||||
Sbjct: 650 agagtatggcaatcatatttattgtgggtcttga-aaatgcagaacgcttatttgttaga 592
Query: 417 catataaaatttagtgtctcatgtagtgctgaaacaaaattaagcataaaatattattga 476
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 591 catatacaatttagtgtctcatgtagtgctgaaacaaaattaagcatgaaatattattga 532
Query: 477 atagaataaaaaccaaaaggtttttatatatactacctagatttttacctgaatacaggt 536
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 531 atagaataaaacccaaaaggtttttgtatatactacctagatttttacctgaatacaggt 472
Query: 537 gatatgggtatatg 550
||| || |||||||
Sbjct: 471 gatgtgtgtatatg 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
