Query= MSMg01no379_m23.b1 MSMg01no379_m23.b1 CHROMAT_FILE:
MSMg01no379_m23.b1 PHD_FILE: MSMg01no379_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:40 2005
(452 letters)
>mm_chr11_61859563_61860413
Length = 851
Score = 692 bits (358), Expect = 0.0
Identities = 413/434 (95%), Gaps = 7/434 (1%)
Strand = Plus / Minus
Query: 23 cacagaagaatttccagagaattgcattaagtcttgccagcatgtaagatgatctatctc 82
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 630 cacagatgaatttccagagaattgcattacgtcttgccagcatgtaagacgatc--tctc 573
Query: 83 tctctctctctctctctctctct----ctctctctctctcacacacacacacacacacac 138
||||||||||||||||||||||| | | | | | | |||||||||||||||||||||
Sbjct: 572 tctctctctctctctctctctctcacacacacacacacacacacacacacacacacacac 513
Query: 139 acacagcactcatgttgaatataagcagtagacgggctggggtgtaggtcagtcctagag 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 acacagcactcatgttgaatataagcagtagacgggctggggtgtaggtcagtcctagag 453
Query: 199 caaacacagcacctgaagagcattgggatccagcctgagcatctgtaatgtgctgagtca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaacacagcacctgaagagcattgggatccagcctgagcatctgtaatgtgctgagtca 393
Query: 259 aatacatactaatacaaatggatatacgttaagggttaggaggacagatcgatggctaaa 318
||||| |||||||||||||||| | |||||| |||||||||||||||||| | |||||||
Sbjct: 392 aatacgtactaatacaaatggaaa-acgttacgggttaggaggacagatcaagggctaaa 334
Query: 319 cctgtaaagggcttgccacacaaacatgaggacctgtttcagtcctcagaatccatgtaa 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cctgtaaagggcttgccacacaaacatgaggacctgtttcagtcctcagaatccatgtaa 274
Query: 379 gaaaggcagggatagcaggccaagcctgtaatgcatataaatagtgctcactgggcacac 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gaaaggcagggatagcaggccaagcctgtaatgcatataaatagtgctcactgggcacac 214
Query: 439 agaggcaggaggat 452
||||||||||||||
Sbjct: 213 agaggcaggaggat 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_m23.g1 MSMg01no379_m23.g1 CHROMAT_FILE:
MSMg01no379_m23.g1 PHD_FILE: MSMg01no379_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:40 2005
(368 letters)
>mm_chr11_61733093_61733860
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Plus
Query: 1 ttacatggatacgtaatgctcagtcacctttatttgaaggttctagatagcagcatctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacatggatacgtaatgctcagtcacctttatttgaaggttctagatagcagcatctga 260
Query: 61 tacaattccctctcctcagtggaaatggcctgccaaggagacagcaggagaagagggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaattccctctcctcagtggaaatggcctgccaaggagacagcaggagaagagggtgt 320
Query: 121 gggtgaggggtgggggcggacacactgggagcatcaggaatctaggggtgtggggaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtgaggggtgggggcggacacactgggagcatcaggaatctaggggtgtggggaggaa 380
Query: 181 gaggcagctgagtggttggcaactaccgtaactagggcctcttttcttttctggtcttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggcagctgagtggttggcaactaccgtaactagggcctcttttcttttctggtcttta 440
Query: 241 tggctctgtacaacatcatttcaatctttctgtagaaattttcctttacttatttgaagg 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tggctctgtacaacatcatttcaatctttctgtagaaatttccctttacttatttgaagg 500
Query: 301 accctctgagatagatagatagatagatagatagatagatagatagatagatagat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accctctgagatagatagatagatagatagatagatagatagatagatagatagat 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
