Query= MSMg01no381_e05.b1 MSMg01no381_e05.b1 CHROMAT_FILE:
MSMg01no381_e05.b1 PHD_FILE: MSMg01no381_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:36 2005
(244 letters)
>mm_chr11_96297415_96298058
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 1 aaatgtgtgagcaagagctataccgtaagccgctgagagttccagatatgtgttacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatgtgtgagcaagagctataccgtaagccgctgagagttccagatatgtgttacacag 385
Query: 61 cctcttgcactaaagttgactaacacctaacctaaatcatacatcatttaatctgtggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctcttgcactaaagttgactaacacctaacctaaatcatacatcatttaatctgtggtt 325
Query: 121 caaatgggagggatcactagactggatgcttaattctaaacatccgagagtggtcgagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaatgggagggatcactagactggatgcttaattctaaacatccgagagtggtcgagaa 265
Query: 181 tacagctcaattggtatagtgcttgcttggcacacccaacaccctggttctattcccagc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacagctcaattggtacagtgcttgcttggcacacccaacaccctggttctattcccagc 205
Query: 241 acca 244
||||
Sbjct: 204 acca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no381_e05.g1 MSMg01no381_e05.g1 CHROMAT_FILE:
MSMg01no381_e05.g1 PHD_FILE: MSMg01no381_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:37 2005
(511 letters)
>mm_chr11_96113898_96114808
Length = 911
Score = 957 bits (495), Expect = 0.0
Identities = 507/513 (98%), Gaps = 4/513 (0%)
Strand = Plus / Plus
Query: 1 cgtaagacagcaagctagtcagtgagcatcggtgaggatttgcccaagcatgccacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtaagacagcaagctagtcagtgagcatcggtgaggatttgcccaagcatgccacagag 260
Query: 61 acataaagtcacacactcccaattacatctgtgctaagtaacaaaaatagcattgtttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acataaagtcacacactcccaattacatctgtgctaagtaacaaaaatagcattgtttgc 320
Query: 121 ctgggaacctcccttctccccatttcaaataagacagtctgcagtgtagttcacatatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgggaacctcccttctccccatttcaaataagacagtctgcagtgtagttcacatatgg 380
Query: 181 tagcatgctgcccaggtctgggctttccagaagagatagaattgaggagacccatactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tagcatgctgcccaggtctgggctttccagaagagatagaattgaggagacccatcctgg 440
Query: 241 aggatctgggcttcccgagggccaagttcctgtgtctggatacacttagcttactctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggatctgggcttcccgagggccaagttcctgtgtctggatacacttagcttactctttt 500
Query: 301 ggggaaagagagacgggcttttcctgagagaatattctttccaaatgttcctgggaccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggaaagagagacgggcttttcctgagagaatattctttccaaatgttcctgggaccct 560
Query: 361 gggaccaattgcacttggttacaagtccagagaagcagccactagagatcaaagaagcct 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 gggaccaattgcacttggttacaagtccagagaagcagccaccagagatcaaagaagcct 620
Query: 421 ccttcactttaattacattgctcttgtctccccactctcaggggtctcccactccaaca- 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttcactttaattacattgctcttgtctccccactctcaggggtctcccactccaacat 680
Query: 480 ---cacacacacacacacacacacacacacgca 509
||||||||||||||||||||||||||||||
Sbjct: 681 acacacacacacacacacacacacacacacgca 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
