Query= MSMg01no381_l06.b1 MSMg01no381_l06.b1 CHROMAT_FILE:
MSMg01no381_l06.b1 PHD_FILE: MSMg01no381_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:12 2005
(189 letters)
>mm_chr11_74206994_74207583
Length = 590
Score = 340 bits (176), Expect = 2e-98
Identities = 185/188 (98%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 1 aaggccaccaaacagagctcctgatggcctccagccaagtctatccctctcccatgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaccaaacagagctcctgatggcctccagccaagtctatccctctcccatgctgc 260
Query: 61 ccat-ccccccaggcagagctatgaatggagagccggtcccatagtgaactgagcggggc 119
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatcccccccgggcagagctatgaatggagagccggtcccatagtgaactgagcggggc 320
Query: 120 cattcagaaatcaatgcagtacccttggattcctgagagggactgggtaggagggggtgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cattcagaaatcaatgcagtacccttggattcctgagagggactgggtaggagggggggg 380
Query: 180 gagggggg 187
||||||||
Sbjct: 381 gagggggg 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 590
Length adjustment: 8
Effective length of query: 181
Effective length of database: 582
Effective search space: 105342
Effective search space used: 105342
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no381_l06.g1 MSMg01no381_l06.g1 CHROMAT_FILE:
MSMg01no381_l06.g1 PHD_FILE: MSMg01no381_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:12 2005
(436 letters)
>mm_chr11_74404745_74405580
Length = 836
Score = 820 bits (424), Expect = 0.0
Identities = 433/436 (99%)
Strand = Plus / Minus
Query: 1 actatgtagaccaagctggccttgaacttgagatttgtgttctcctgagtgctgggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 actatgtagaccaagctggccttgaacttgagatttgtgttctcctgagtgctgggatta 767
Query: 61 aaggcctctaagacatcttcataggaaaacacagaaaacacagtacatttagagtttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaggcctctaagacatcttcataggaaaacacagaaaacacagtacatttagagtttggt 707
Query: 121 actgaacttggtttcaggagtcactgggactgagggcttgtaatatttctggaggataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 actgaacttggtttcaggagtcactgggactgagggcttgtaatatttctggaggataga 647
Query: 181 gggatgactgtggatagtatgacaggggtaaggtaaaatcaaagctggcctctaatcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gggatgactgtggatagtatgacaggggtaaggtaaaatcaaagctggcctctaatcctg 587
Query: 241 tctgcacccatgtacctgagcaaggcaaatggcttcctgaagggttctgactcggtggct 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tctgcacccaggcacctgagcaaggcaaatggcttcctgaagggttctgactcggtggct 527
Query: 301 tgtttcagacactgaccaaagtaagccctcatctttttctttttctttctttcttttttg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 526 tgtttcagacactgaccaaagtaagcactcatctttttctttttctttctttcttttttg 467
Query: 361 ttgtagttttttattttcaattttattattctttaagacatacatttatggtgtgtgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgtagttttttattttcaattttattattctttaagacatacatttatggtgtgtgtgt 407
Query: 421 ctgtgtgtgtaatggt 436
||||||||||||||||
Sbjct: 406 ctgtgtgtgtaatggt 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
