Query= MSMg01no383_n13.b1 MSMg01no383_n13.b1 CHROMAT_FILE:
MSMg01no383_n13.b1 PHD_FILE: MSMg01no383_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:00 2005
(549 letters)
>mm_chr11_100708821_100709768
Length = 948
Score = 1023 bits (529), Expect = 0.0
Identities = 544/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 1 aaatgaaggcaaggaaggcatcactaagattgttcatacatccgggcatgacttcacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgaaggcaaggaaggcatcactaagattgttcatacatccgggcatgacttcacaga 260
Query: 61 ggcacacaccttgtagggcgttagaacaatgaggcttccattgagcccactttcaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcacacaccttgtagggcgttagaacaatgaggcttccattgagcccactttcaactaa 320
Query: 121 caccagatttaaggatgttattttcctctttatagatccttcctttactataaggacaca 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 caccagatttaaggatgttattttcctctttatagatcctttctttactataaggacaca 380
Query: 181 cgtatcccttgcctacgtaacaaaccagaggaaccacagcaagtatattcacctatatac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtatcccttgcctacgtaacaaaccagaggaaccacagcaagtatattcacctatataa 440
Query: 241 gcctgatacagactgactgtaatatcattgggacgaaaaaaaattaaacatataccaaaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 gcctgatacagactgactgtaatatcattgggacgaaaaaaa-ttaaacatataccaaaa 499
Query: 301 agcagtaaatgatgcttttgatcccaatgggatccttgtgtataagaaggaggaggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcagtaaatgatgcttttgatcccaatgggatccttgtgtataagaaggaggaggaaga 559
Query: 361 ggaagaagaggaagaagaggaggaggaggaggaagagaaatcaatcgagactaagaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaagaagaggaagaagaggaggaggaggaggaagagaaatcaatcgagactaagaaaat 619
Query: 421 ggaggtgaaatgagaagtcagagtcaataggaagtgttggccaaaatatttctgttgcca 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 ggaggtgaaatgagaagtcagagtcaataggaagtgttggccaaaatatttctgttgcaa 679
Query: 481 tcccccaagcactgatagtatttgtcctcccgcccccttacacacatcacaaagcacaca 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 680 tcccccaagcactgatagtatttgtcctcccgcccccttacacacatcacaaagcataca 739
Query: 541 cggaagcat 549
|||||||||
Sbjct: 740 cggaagcat 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_n13.g1 MSMg01no383_n13.g1 CHROMAT_FILE:
MSMg01no383_n13.g1 PHD_FILE: MSMg01no383_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:00 2005
(169 letters)
>mm_chr11_100904247_100904820
Length = 574
Score = 284 bits (147), Expect = 2e-81
Identities = 165/173 (95%), Gaps = 5/173 (2%)
Strand = Plus / Minus
Query: 1 actaaatcacaggaaaattgctgca----tttttttttcaaagatca-ttattttgtacc 55
||||||||||||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct: 373 actaaatcacaggaaaattgctgcatctttttttttttcaaagatcattttttttgtacc 314
Query: 56 tataaacagatcaggaactaatatgaagcttcatttaagaccatgaggattgtataatag 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tataaacagatcaggaactaatatgaagcttcatttaagaccatgaggattgtataatag 254
Query: 116 agattgcttctacaatagagaccagagccctgacttactgattcctctccaga 168
||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 253 agattgcttctacaatatagaccggagccctgacttactgattcctctccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 574
Length adjustment: 8
Effective length of query: 161
Effective length of database: 566
Effective search space: 91126
Effective search space used: 91126
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
