Query= MSMg01no384_g14.b1 MSMg01no384_g14.b1 CHROMAT_FILE:
MSMg01no384_g14.b1 PHD_FILE: MSMg01no384_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:42 2005
(500 letters)
>mm_chr11_97325729_97326628
Length = 900
Score = 951 bits (492), Expect = 0.0
Identities = 498/500 (99%)
Strand = Plus / Minus
Query: 1 ctcccaggccccgagagcctttaggggaggaatcggctttgggcccagagctatggctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctcccaggccccgagagcctttaggggaggaatcggctttgggcccagagctatggctgc 641
Query: 61 agagggaaaaggaagaggaggggtgtcttcatctggagcggcccagagtgccactttccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 640 agagggaaaaggaagaggaggggtgtcttcatctggagcggcccagagtgccgctttccc 581
Query: 121 tggcctccgtcctctccaactagagacaattctctcggctcacttgtctgagcgaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tggcctccgtcctctccaactagagacaattctctcggctcacttgtctgagcgaggact 521
Query: 181 agagatctctgcctggaaactcccaaccccataggctttcctccccaccacaggctgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agagatctctgcctggaaactcccaaccccataggctttcctccccaccacaggctgctc 461
Query: 241 tgggagaactggtcttacctcactttgcgatagtcattaagcttcttgctgatcagagct 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgggagaactggccttacctcactttgcgatagtcattaagcttcttgctgatcagagct 401
Query: 301 tggttggcacagccggggtcctgcagtgaggggagggggaggagagatgaaccacatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tggttggcacagccggggtcctgcagtgaggggagggggaggagagatgaaccacatcag 341
Query: 361 ggcccacagcccacgttaccagagttcctccctggcccctgcctcagccttgcctctctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggcccacagcccacgttaccagagttcctccctggcccctgcctcagccttgcctctctc 281
Query: 421 caccatatggacagcatagacccagatggacaaaggccagggctgacctccctgggcagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 caccatatggacagcatagacccagatggacaaaggccagggctgacctccctgggcagc 221
Query: 481 tgtgtgactttggggaagcc 500
||||||||||||||||||||
Sbjct: 220 tgtgtgactttggggaagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_g14.g1 MSMg01no384_g14.g1 CHROMAT_FILE:
MSMg01no384_g14.g1 PHD_FILE: MSMg01no384_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:42 2005
(523 letters)
>mm_chr11_97118098_97119020
Length = 923
Score = 982 bits (508), Expect = 0.0
Identities = 520/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 1 aaagtgtgcagcaccactaccaggccctgttctattttaaacatatgacccgtcgactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaagtgtgcagcaccactaccaggccctgttctattttaaacatatgacccgtcgactag 259
Query: 61 aatatgtgcgtgcgtgtgt-gtgtgtgtgtgtgtgtgtatatgcatacatacacacatat 119
|||||||||||| || ||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 260 aatatgtgcgtgtgtatgtagtgtgtgtgtgtgtgtatatatgcatacatacacacatat 319
Query: 120 gtacatacacatatatattaatatgtgttataattagtactttattatgttaaaaagaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtacatacacatatatattaatatgtgttataattagtactttattatgttaaaaagaaa 379
Query: 180 tcatgaacttactgttaaatacacctcactatacgaatgtgtcaaaatcaatctctgtgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcatgaacttactgttaaatacacctcactatacgaatgtgtcaaaatcaatctctgtgt 439
Query: 240 tgaacaaatatattagttctaattcattcaccaacacgtgaaatgtctcaataaatattc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgaacaaatatattagttctaattcattcaccaacacgtgaaatgtctcaataaatattc 499
Query: 300 ttttagctataaaatacttttgttatgacttttccttagaatatattcctataacagaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttagctataaaatacttttgttatgacttttccttagaatatattcctataacagaac 559
Query: 360 tggtggtaagagctatttttcttcttcttttttttaacaagctggttttcaaagtattta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggtggtaagagctatttttcttcttcttttttttaacaagctggttttcaaagtattta 619
Query: 420 catgggtttatctctaactagtattgcagagacatttgtttattttcaagaatctttttc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catgggtttatctctaactagtattgcagagacatttgtttattttcaagaatctttttc 679
Query: 480 atttaagtgttatttcaatttcaggggtgggaggggatcagaag 523
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atttaagtgttatttcaatttcaggggtgggaggggatcagaag 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
