Query= MSMg01no384_p06.b1 MSMg01no384_p06.b1 CHROMAT_FILE:
MSMg01no384_p06.b1 PHD_FILE: MSMg01no384_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:22 2005
(412 letters)
>mm_chr11_111497232_111498043
Length = 812
Score = 727 bits (376), Expect = 0.0
Identities = 400/408 (98%)
Strand = Plus / Minus
Query: 5 gaattcctactattaggtaggagggttgaggctcagggatgttacattatttactccaga 64
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 518 gaattcctactagtaggtaggagggttgaggttcagggatgttacattatttactccaga 459
Query: 65 tgtctggagggggccggtacagatcatgactggcatcagagcatgagctcatctgcttat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 458 tgtctggagggggccggtacagatcatgactggcatcagagcatgagctcatatgcttat 399
Query: 125 cggtttatttaatggtactaagccctccatttgctatgtcccaagtgcactggtgctgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cggtttatttaatggtactaagccctccatttgctatgtcccaagtgcactggtgctgca 339
Query: 185 tttacaatatagcatattaagtatatgtgcatgtagggatacataacggatggcatggac 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tttacaatgtagcatattaagtatatgtgcatgtagggatacataacggatggcatggac 279
Query: 245 agtgaaagtatataggcgttgtcctcacagaaagtctgtacatactttcttaactcaaga 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtgtaagtatataggcgttgtcctcacagaaagtctgtacatactttcttaactcaaga 219
Query: 305 aatacactgggtgagtcctgtgaaaacctcagggaagagggctgctagctcagtgaggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aatacactgggtgagtcctgtgaaaacctcagggaagagggctgctagctcagtgaggtg 159
Query: 365 ggagcggctggctgggtggggaagcaccctctcataagcaaaggggag 412
|||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct: 158 ggagtgggtggctgggtggggaagcaccctctcagaagcaaaggggag 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_p06.g1 MSMg01no384_p06.g1 CHROMAT_FILE:
MSMg01no384_p06.g1 PHD_FILE: MSMg01no384_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:23 2005
(460 letters)
>mm_chr11_111350169_111351028
Length = 860
Score = 837 bits (433), Expect = 0.0
Identities = 453/460 (98%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 1 ctgtgctaaatccaactggccctgggttcttttgggttggaagattttaatgtctgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctgtgctaaatccaactggccctgggttcttttgggttggaagattttaatgtctgcttc 261
Query: 61 tactttcttaggaataataggaacatttaaattttttacctgttcttgatttatttaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tactttcttaggaataataggaacatttaaattttttacctgttcttgatttatttaact 321
Query: 121 ttggtaagtgctatctaccaagagaatcatatatttcttttagaatttccaattttgtgg 180
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 322 ttggtaagtgctatctaccaagaaaatcatgtatttcttttagaatttccaattttgtgg 381
Query: 181 agtacaggatcttgaagtaagacttaatgaatctttgaatttccttagttagtctgttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agtacaggatcttgaagtaagacttaatgaatctttgaatttccttagttagtctgttgt 441
Query: 241 tanatttcccttttcatttttgattttgctaacttgagtattgtctctctaccttttagt 300
|| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tatatctcccttt-catttttgattttgctaacttgagtattgtctctctaccttttagt 500
Query: 301 tagtgtagtttgtggaattgtaatgggaatgcaacagttccataacgatttttttttcat 360
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tagtgtagtttgtggaattgtaatgggaatgcaacagttttataacgatttttttttcat 560
Query: 361 tctgagaacttttaaaatccatgtgttactttgattatcagacaaaagtgaatttgaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgagaacttttaaaatccatgtgttactttgattatcagacaaaagtgaatttgaatt 620
Query: 421 tttgaagtgcagtattatgtcctatgctcataatgtatgt 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgaagtgcagtattatgtcctatgctcataatgtatgt 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
