Query= MSMg01no385_d16.b1 MSMg01no385_d16.b1 CHROMAT_FILE:
MSMg01no385_d16.b1 PHD_FILE: MSMg01no385_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:44 2005
(149 letters)
>mm_chr11_78700379_78700927
Length = 549
Score = 281 bits (145), Expect = 2e-80
Identities = 145/145 (100%)
Strand = Plus / Minus
Query: 4 ggaattccctccagctgaagcctctgctcaggcactgcgctccacactggtgttttcact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggaattccctccagctgaagcctctgctcaggcactgcgctccacactggtgttttcact 289
Query: 64 ttctctttctccccagcatcacacggggtaatacagcattgtgcaagctgtagcagaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttctctttctccccagcatcacacggggtaatacagcattgtgcaagctgtagcagaaac 229
Query: 124 aagcttcccgggggggggggggggg 148
|||||||||||||||||||||||||
Sbjct: 228 aagcttcccgggggggggggggggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no385_d16.g1 MSMg01no385_d16.g1 CHROMAT_FILE:
MSMg01no385_d16.g1 PHD_FILE: MSMg01no385_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:44 2005
(497 letters)
>mm_chr11_78530544_78531440
Length = 897
Score = 737 bits (381), Expect = 0.0
Identities = 408/417 (97%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 82 tcattggctcttagatggatatggggcatctgaatccaggacctcatgcttacatagcaa 141
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 281 tcattggctcttagatggatatggggcatctgaacccaggacctcatgcttacatagcaa 340
Query: 142 acatcttacctactgagccgttaccatagcccctctatgttgtcttatgagtgattactt 201
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 341 acatcttacctactgagccattaccatagcccttctatgttgtcttatgagtgattattt 400
Query: 202 tctacccttacttaatataataagttagcaaacttatctc-ttttttccctaagcagggg 260
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 401 tctacccttacttaatataataagttagcaaacttatctctttttttccctaagtagggg 460
Query: 261 ttctctgtgtagccctggctgtcctagaaactgctttgtagaccaggctggcctcaaact 320
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 461 ttctctgtgtagccctggctgtcctcgaaactgctttgtagaccaggctggcctcaaact 520
Query: 321 cagagatctgctgcctctgcctccggagtgctgggattaaaggcaagcactgtcaagtct 380
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 521 cagagatctgctgcctctgcctccagagtgctgggattaaaggcaagcactgtcaagtct 580
Query: 381 ggctagcaagtttacctaatccaccacatgctatacatgtttagaaagttattggcttga 440
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 581 ggctagcaagtttacctaatccaccacatgctatacatgtttagaaggttattggcttga 640
Query: 441 gaatcagccagaggatctcaggatgtctagatttgtgccatggtaacagatcattta 497
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gaatcagccagaggatctcaggatgtctagatttgtgccatggtaacagatcattta 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
