Query= MSMg01no385_j20.b1 MSMg01no385_j20.b1 CHROMAT_FILE:
MSMg01no385_j20.b1 PHD_FILE: MSMg01no385_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:14 2005
(602 letters)
>mm_chr11_84038962_84039963
Length = 1002
Score = 1114 bits (576), Expect = 0.0
Identities = 592/598 (98%), Gaps = 2/598 (0%)
Strand = Plus / Minus
Query: 5 gaattcctcattacagaatggagttaaggaaggtctttgacattttggcctctacatatg 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 gaattcctcattagagaatggagttaaggaaggtctttgacattttggcctctacatatg 911
Query: 65 cccatgtccatgtgtgtgcacatgcatgtgtatttatacgtctatgtatgtatatatata 124
|||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 910 cccatgtccatgcgtgtgcacatgcatgtgtatgtatacgtctatgtatg--tatatata 853
Query: 125 tattatgtgttcatgcatacagacatcacacagacatatgaaaattaacaaacaaacaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tattatgtgttcatgcatacagacatcacacagacatatgaaaattaacaaacaaacaaa 793
Query: 185 ccaagaaataatgtcttaccactgccactccagggaagagttgggatacctgcagtttga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ccaagaaataatgtcttaccactgccactccagggaagagttgggatacctgcagtttga 733
Query: 245 gccacaatagaagatgcaatcttatcccccaaagcccacatggcctggcttggagggcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gccacaatagaagatgcaatcttatcccccaaagcccacatggcctggcttggagggcct 673
Query: 305 aaaacaatacaagacaagaaaagaaccttaacagcagcatctctgcctccttatatttgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aaaacaatacaagacaagaaaagaaccttaacagcagcatctctgcctccttatatttgg 613
Query: 365 taaagatactggccttataatgatttttataattcttttgtcccacttatgacatggtga 424
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 612 taaagatactggccttataataatttttataattcttttgtcccacttatgacatggtga 553
Query: 425 tcatttagactcatctttacattgtttctagaatccaatgttgtacacagggcaagtcca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcatttagactcatctttacattgtttctagaatccaatgttgtacacagggcaagtcca 493
Query: 485 atatatagaaattctatctttaaatttctgaaaaacacaatttttgtgaattgtgctcca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atatatagaaattctatctttaaatttctgaaaaacacaatttttgtgaattgtgctcca 433
Query: 545 cattaaccaagtaacaaagtcatttctccaaagctaaatcctaaagtaaagctggtaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cattaaccaagtaacaaagtcatttctccaaagctaaatcctaaagtaaagctggtaa 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_j20.g1 MSMg01no385_j20.g1 CHROMAT_FILE:
MSMg01no385_j20.g1 PHD_FILE: MSMg01no385_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:14 2005
(411 letters)
>mm_chr11_83840983_83841794
Length = 812
Score = 781 bits (404), Expect = 0.0
Identities = 410/412 (99%), Gaps = 1/412 (0%)
Strand = Plus / Plus
Query: 1 ttagtgctctcagctgacagcctggtggtccctggctgcccgttgtgtcctaaacagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtgctctcagctgacagcctggtggtccctggctgcccgttgtgtcctaaacagcaa 260
Query: 61 acctcactatcgtttcattgcttctggttttgcatcattaaagtaaagtgaagggccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctcactatcgtttcattgcttctggttttgcatcattaaagtaaagtgaagggccaga 320
Query: 121 gagatagcactgccctggtttgtttgctttgtttggtttggttagg-ttttttttttcct 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gagatagcactgccctggtttgtttgctttgtttggtttggttaggtttttttttttcct 380
Query: 180 ttgtcggtgctaaggatggacctcaaggcccatgaaggctagagaagttatctgctactg 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcagtgctaaggatggacctcaaggcccatgaaggctagagaagttatctgctactg 440
Query: 240 agccacacacccctacctagctcttttctttctttctcttttttaaaaaagcctttatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccacacacccctacctagctcttttctttctttctcttttttaaaaaagcctttatca 500
Query: 300 gtctattctttgtgcaactacctgactggtcctcgtaaaccatagatctgactgtttcat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctattctttgtgcaactacctgactggtcctcgtaaaccatagatctgactgtttcat 560
Query: 360 ttaaatcccatttaaaatcctgcagtgggcctccatggtcttccaaagcctt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaatcccatttaaaatcctgcagtgggcctccatggtcttccaaagcctt 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 812
Length adjustment: 9
Effective length of query: 402
Effective length of database: 803
Effective search space: 322806
Effective search space used: 322806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
