Query= MSMg01no387_j17.b1 MSMg01no387_j17.b1 CHROMAT_FILE:
MSMg01no387_j17.b1 PHD_FILE: MSMg01no387_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:42 2005
(404 letters)
>mm_chr11_8370590_8371393
Length = 804
Score = 627 bits (324), Expect = 0.0
Identities = 375/400 (93%), Gaps = 14/400 (3%)
Strand = Plus / Plus
Query: 5 gaattctccctgactattctgcagagaaaggctttaaaacaaaacacaccccacacccaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctgacaattctgcagagaaaggctttaaaacaaaacacaccccacacccaa 264
Query: 65 acccatgtgcccgccacctcatggtcacccaatgccatagccttccgagaaaactgaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 acccatgtgcccgccacctcatggtcacccaatgccatagccttccgagaaaactaaaat 324
Query: 125 ccaacagctggtgacactgactttccaccagtgtgccatgctgaaacccaaggaacacca 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaacagctggtgacactgactttctaccagtgtgccatgctgaaacccaaggaacacca 384
Query: 185 aacttacccataatgccctttggaacactttcccccacaaagacatcaagtggctgcctg 244
|| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatttacccacaataccctttggaacactttcccccacaaagacatcaagtggctgcctg 444
Query: 245 tatttttctgtaaatgtgctcactggtcgttcctcacaggttcgggcatagcagtgcaca 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatttctctgtaaatgtgctcactggtcgttcctcacaggttcgggcatagcagtgcaca 504
Query: 305 gttcctatgtagcactaatagggcgatacactcctaagtgcaaatgtaaccaggagaatt 364
||||||||||||||||||||||| ||||||||| || || ||||||||
Sbjct: 505 gttcctatgtagcactaatagggtgatacactctta----------ta----ggagaatt 550
Query: 365 tgctgatatgaccatccatgtgctgtgtattatgcatctg 404
|||||| ||||||||||||||||| |||||||||||||||
Sbjct: 551 tgctgacatgaccatccatgtgctatgtattatgcatctg 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_j17.g1 MSMg01no387_j17.g1 CHROMAT_FILE:
MSMg01no387_j17.g1 PHD_FILE: MSMg01no387_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:42 2005
(360 letters)
>mm_chr11_8558317_8559076
Length = 760
Score = 636 bits (329), Expect = 0.0
Identities = 353/361 (97%), Gaps = 2/361 (0%)
Strand = Plus / Minus
Query: 1 tccttctgaatgggtctgagaagctcctggcctgtgactggaagaatttcctggtttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tccttctgaatgggtctgagaagctcctggcctgtgactggaagaatttcctggtttgaa 501
Query: 61 ggtgttgtaagacccccctgcctgggaggagacacttagcattttcccaagctacaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggtgttgtaagacccccctgcctgggaggagacacttagcattttcccaagctacaatga 441
Query: 121 gggcaggtttccacaaggagatcagaatgataaatggcttcatcccagtgatagggacag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gggcaggtttccacagggagatcagaatgataaatggcttcatcccagtgatagggacag 381
Query: 181 atgtgttcagtttgactcctgtgaaaacacctatagagtcaggtgctcaggggtggagga 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtgtgttcagtttgacgcctgtgaaaacacctatagagtcaggtgctcaggggtggagga 321
Query: 241 aaggcaggcttcttagataggtggttcacatatgggtgggggct-ggtctggcactcgag 299
|||||||||||| ||||||||||||||||||||||||||||||| ||| |||| |||| |
Sbjct: 320 aaggcaggcttcatagataggtggttcacatatgggtgggggctgggt-tggcgctcggg 262
Query: 300 ggctgtttgggaatgtgttttcaaatcctcctcagttttacccttgaggcaatagatgag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctgtttgggaatgtgttttcaaatcctcctcagttttacccttgaggcaatagatgag 202
Query: 360 g 360
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
