Query= MSMg01no388_a12.b1 MSMg01no388_a12.b1 CHROMAT_FILE:
MSMg01no388_a12.b1 PHD_FILE: MSMg01no388_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:16 2005
(466 letters)
>mm_chr11_108748083_108748944
Length = 862
Score = 866 bits (448), Expect = 0.0
Identities = 460/466 (98%), Gaps = 4/466 (0%)
Strand = Plus / Plus
Query: 1 taaagaagtttgggaaggntttttttttttttttttttctagctgactccgatttaactg 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaagaagtttgggaag----tttttttttttttttttctagctgactccgatttaactg 256
Query: 61 aatggatggcttgactgttctttaaagtcatttccgactgttccaaacgctgcctctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aatggatggcttgactgttctttaaagtcatttccgactgttccaaacgctgcctctttt 316
Query: 121 tgagaacaacagaagacctaccctacaggatgttccagtaaaacagggtaggtgggaaga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 317 tgagaacaacagaagacctaccctacaggacgttccagtaaaacagggtaggtgggaaga 376
Query: 181 catttccatttcaatggaaaactgagataattacaaaaatgccaagactctaaggctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 catttccatttcaatggaaaactgagataattacaaaaatgccaagactctaaggctcat 436
Query: 241 acccaaactgcttctccatagctgtggggacagatgcccttcagctactccagggaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acccaaactgcttctccatagctgtggggacagatgcccttcagctactccagggaactc 496
Query: 301 cccagtgtgacatcggtgattcacaggagcccctcaaaggcaaggggcttctgggtagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cccagtgtgacatcggtgattcacaggagcccctcaaaggcaaggggcttctgggtagag 556
Query: 361 tggccattgtccatccagtcagtgtggctgctttcgggaaagcatggggcctgtgtttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tggccattgtccatccagtcagtgtggctgctttcgggaaagcatggggcctgtgtttct 616
Query: 421 tctccaagctctcatggccgtgcttccctcttcccccacaatgcct 466
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 617 tctccaagctctcatggccatgcttccctcttcccccacaatgcct 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 862
Length adjustment: 10
Effective length of query: 456
Effective length of database: 852
Effective search space: 388512
Effective search space used: 388512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_a12.g1 MSMg01no388_a12.g1 CHROMAT_FILE:
MSMg01no388_a12.g1 PHD_FILE: MSMg01no388_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:16 2005
(443 letters)
>mm_chr11_108895316_108896158
Length = 843
Score = 810 bits (419), Expect = 0.0
Identities = 437/443 (98%)
Strand = Plus / Minus
Query: 1 tgctgggacagtaaagaaaatatcagtgtgattacctcagtgttagagcgggcaacttaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 643 tgctgggacagtaaagaaaatatcagtgtgattacttcagtgttagagcgggcaacttaa 584
Query: 61 acctaggtagtaatttgggggatccagaggaagtgatgctgaataaagtatatgccccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 acctaggtagtaatttgggggatccagaggaagtgatgctgaataaagtatatgccccca 524
Query: 121 caattataaatacataaaacatgtatttatacagatgaaaaatggaaggggctgtggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 caattataaatacataaaacatgtatttatacagatgaaaaatggaaggggctgtggagg 464
Query: 181 aatataaatactgtgtatgattgattggtgggattatgggcatgccctctttgatgcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aatataaatactgtgtatgattgattggtgggattatgggcatgccctctttgatgcttt 404
Query: 241 tattttggaaggaaatgtttcaaagcccctttgaatctctctaatgagggggctgttgga 300
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 taagttggaaggaaatgtttcaaagcccctttgaatctctctaatgagggggctgttgga 344
Query: 301 ggtgagtggcgattccagccacaggcctgggaggaaggcccttctgcactgctcatggca 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 343 ggtgagtggcgattccagccacaggcctgggaggaaggggtttctgcactgctcatggca 284
Query: 361 actggccaactcctcacacaaaagccgaggctgccttacatctggatggatggcagaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 actggccaactcctcacacaaaagccgaggctgccttacatctggatggatggcagaacc 224
Query: 421 tttctttggaggcttgccatccc 443
|||||||||||||||||||||||
Sbjct: 223 tttctttggaggcttgccatccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
