Query= MSMg01no389_c16.b1 MSMg01no389_c16.b1 CHROMAT_FILE:
MSMg01no389_c16.b1 PHD_FILE: MSMg01no389_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:40 2005
(255 letters)
>mm_chr11_101472533_101473188
Length = 656
Score = 480 bits (248), Expect = e-140
Identities = 254/256 (99%), Gaps = 1/256 (0%)
Strand = Plus / Minus
Query: 1 gggacttctgaggtttctcactgcaaaagatgctgacctctttggaaacatcatttg-aa 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 456 gggacttctgaggtttctcactgcaaaagatgctgacctctttggaaacatcatttgaaa 397
Query: 60 agtgcgaatttttctttctgaactgtcagctctccatatattttggacatggactcaatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agtgcgaatttttctttctgaactgtcagctctccatatattttggacatggactcaatg 337
Query: 120 gtccttacttcagtgagacagaaaataatggttaaaatggtcagtgctacagtcacaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 336 gtccttacttcagtgagacagaaaataatggttaaaatggtcagtgctacagtcacagat 277
Query: 180 gagcttgttgctatcactgtatcctggaacctctttgtgtcctaaaaggacacattattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gagcttgttgctatcactgtatcctggaacctctttgtgtcctaaaaggacacattattt 217
Query: 240 taacaacaaagatggg 255
||||||||||||||||
Sbjct: 216 taacaacaaagatggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 656
Length adjustment: 9
Effective length of query: 246
Effective length of database: 647
Effective search space: 159162
Effective search space used: 159162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_c16.g1 MSMg01no389_c16.g1 CHROMAT_FILE:
MSMg01no389_c16.g1 PHD_FILE: MSMg01no389_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:41 2005
(241 letters)
>mm_chr11_101273621_101274261
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 tgtgatgtgtaccaggaatctgttcaaaaagatgggtgctgtgggggtcctgatgaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgatgtgtaccaggaatctgttcaaaaagatgggtgctgtgggggtcctgatgaggtc 260
Query: 61 agagcatgtccacgagcagccacagcaggtctgtagccttggtaacagctttacacacaa 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 agagcatgtccacgagcagccacagcaggtctatagccttggtaacagctttacacacaa 320
Query: 121 ggaagatttgcagagcaggggagtgaggagacccccttttcttttcttttcttttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaagatttgcagagcaggggagtgaggagacccccttttcttttcttttcttttctttt 380
Query: 181 ctttccttttcttttaaggattgttgaggctgctctgtgacagaggactcagctagcaca 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ctttccttttcttttaaggattgttgaggctgctctgtgacagagggctcagctagcaca 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
