Query= MSMg01no390_c18.b1 MSMg01no390_c18.b1 CHROMAT_FILE:
MSMg01no390_c18.b1 PHD_FILE: MSMg01no390_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:00 2005
(545 letters)
>mm_chr11_68168881_68169825
Length = 945
Score = 986 bits (510), Expect = 0.0
Identities = 537/546 (98%), Gaps = 3/546 (0%)
Strand = Plus / Minus
Query: 2 ggaattcactatgtataccaggct-gccttgaactcagagtgctgggattaaaggtgtac 60
||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 831 ggaattcactatgtagaccaggctggcctcgaactcagagtgctgggattaaaggtgtac 772
Query: 61 accaccatacctggtctcatagcagtcttcaggtattttaaatattatcattattatttc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 771 accaccatgcctggtctcatagcagtcttcaggtattttaaatattatcattactatttc 712
Query: 121 tgcaaagtcaggtctcacactagctaagtactctaccagtctgatacatctctatgtagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgcaaagtcaggtctcacactagctaagtactctaccagtctgatacatctctatgtagc 652
Query: 181 ctccc-atatattatcaagcattttcaaataaggcaaaatagatagttaatttttttcag 239
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 c-ccctatatattatcaagcattttcaaataaggcaaaatagatagttaatttttttcag 593
Query: 240 cttttgaacatggatttttctggctcttttcttaagcccttctcccagaccagatgcgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cttttgaacatggatttttctggctcttttcttaagcccttctcccagaccagatgcgca 533
Query: 300 ctcagtacatatacatcaggtaatacatcacggaaaagcccctgggcagcctagagaaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctcagtacatatacatcaggtaatacatcacggaaaagcccctgggcagcctagagaaca 473
Query: 360 ctcaccagaaaagagggaaaagccattaaccagtgaaataaccaggtgtctgaagagcca 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 472 ctcaccagaaaagagggaaaagccattaaccagtgaaatagccaggtgtctgaagagcca 413
Query: 420 acgactgggcagcctcatgttaacttggcggaaatcccaatgggtgcctggcacgtgctg 479
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 412 acgactgggcagcctcatgttaacttggcggagatcccaatgggtgcctggcacgtgctg 353
Query: 480 gttcaggctgtatgcaacatgttaggttgccgtgaaaaggagggcaccacagaacgttag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gttcaggctgtatgcaacatgttaggttgccgtgaaaaggagggcaccacagaacgttag 293
Query: 540 gaatga 545
||||||
Sbjct: 292 gaatga 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_c18.g1 MSMg01no390_c18.g1 CHROMAT_FILE:
MSMg01no390_c18.g1 PHD_FILE: MSMg01no390_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:00 2005
(347 letters)
>mm_chr11_68025814_68026560
Length = 747
Score = 661 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Plus
Query: 1 ctagacagcgggtgatggagaaaggaggggggcgtgactagtgtctggtggtggattggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagacagcgggtgatggagaaaggaggggggcgtgactagtgtctggtggtggattggt 260
Query: 61 tgcccctgcccaggctgcaggcccaaaaattcacagttcttacatcccccttcaataacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcccctgcccaggctgcaggcccaaaaattcacagttcttacatcccccttcaataacc 320
Query: 121 atcaaacacagcgactgtagaccactgtgccattctgttcccgcctctcaggacctccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaaacacagcgactgtagaccactgtgccattctgttcccgcctctcaggacctccct 380
Query: 181 aacccctccacggcgacccccacctagccctagggaagcgcatctctgttctggaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccctccacggcgacccccacctagccctagggaagcgcatctctgttctggaaggag 440
Query: 241 cgccgtgaggtatctatgtcttgtcctcatttctccagggcctggcctgtcaatacaggg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgccgtgaggtagctatgtcttgtcctcatttctccagggcctggcctgtcaatacaggg 500
Query: 301 tgctttctgccatgcgcataagagcgcagccaggggtgtgagggtg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctttctgccatgcgcataagagcgcagccaggggtgtgagggtg 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
