MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-390G12
Chromosome	11 (Build37)
Map Location	104,268,977 - 104,269,419
singlet/doublet	singlet
Overlap gene	1700081L11Rik
Upstream gene	Plekhm1, Lrrc37a, Gm884, Lyzl6, Rprml, Gosr2, Wnt9b, Wnt3, Nsf, EG667631, Arf2, LOC100042645, Crhr1, 4933407P14Rik, Mapt
Downstream gene	Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190
Link	Open Mouse BAC browser

Click to get alignment info.

name	Plekhm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353047 MGI:2443207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc37a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237954 MGI:2685097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	Gm884 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380730 MGI:2685730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lyzl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69444 MGI:1916694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rprml (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104582 MGI:2144486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gosr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56494 MGI:1927204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt9b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22412 MGI:1197020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22415 MGI:98955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nsf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18195 MGI:104560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667631 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667631 MGI:3644778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins

name	Arf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11841 MGI:99595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042645 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Crhr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12921 MGI:88498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933407P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237958 MGI:3045264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mapt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17762 MGI:97180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1700081L11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76719 MGI:1923969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217232 MGI:102685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17896 MGI:97267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666721 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 210 ESTs, 2 Proteins pseudo : _no_value

name	EG629959 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629959 MGI:3645610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs, 2 Proteins

name	Itgb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16416 MGI:96612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC629960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666749 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins

name	LOC632784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:632784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC276809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:276809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041125 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	4921510J17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70894 MGI:1918144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mettl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52686 MGI:1289171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666771 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Tlk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24086 MGI:1346023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700052K11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73431 MGI:1920681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs

name	Mrc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17534 MGI:107818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf190 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632687 MGI:2443469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33942119 GeneID:353047 MGI:2443207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family M (with RUN domain) member 1 transcript_id : NM_183034.1

name	Lrrc37a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262452 GeneID:237954 MGI:2685097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : leucine rich repeat containing 37A transcript_id : XM_137868.8

name	Gm884 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701938 GeneID:380730 MGI:2685730
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 884, (NCBI) transcript_id : NM_001033434.1

name	Lyzl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037160 GeneID:69444 MGI:1916694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysozyme-like 6 transcript_id : NM_027083.1

name	Rprml (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802486 GeneID:104582 MGI:2144486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : reprimo-like transcript_id : NM_001033212.2

name	Gosr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24528552 GeneID:56494 MGI:1927204
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi SNAP receptor complex member 2 transcript_id : NM_019650.2

name	Wnt9b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801906 GeneID:22412 MGI:1197020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-type MMTV integration site 9B transcript_id : NM_011719.3

name	Wnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678592 GeneID:22415 MGI:98955
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-related MMTV integration site 3 transcript_id : NM_009521.1

name	Nsf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354532 GeneID:18195 MGI:104560
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-ethylmaleimide sensitive fusion protein transcript_id : NM_008740.3

name	EG667631 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262541 GeneID:667631 MGI:3644778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins product : predicted gene, EG667631 transcript_id : XM_001004030.2

name	Arf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363605 GeneID:11841 MGI:99595
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor 2 transcript_id : NM_007477.3

name	LOC100042645 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262542 GeneID:100042645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042645 transcript_id : XM_001479545.1

name	Crhr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367735 GeneID:12921 MGI:88498
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone receptor 1 transcript_id : NM_007762.3

name	4933407P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126722668 GeneID:237958 MGI:3045264
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933407P14 gene transcript_id : NM_001082535.1

name	4933407P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723605 GeneID:237958 MGI:3045264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933407P14 gene transcript_id : NM_199019.2

name	Mapt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370346 GeneID:17762 MGI:97180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein tau transcript_id : NM_001038609.1

name	Mapt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370354 GeneID:17762 MGI:97180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein tau transcript_id : NM_010838.3

name	1700081L11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486667 GeneID:76719 MGI:1923969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700081L11 gene transcript_id : NM_001081045.1

name	Cdc27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378021 GeneID:217232 MGI:102685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 27 homolog (S. cerevisiae) transcript_id : NM_145436.2

name	Myl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130182 GeneID:17896 MGI:97267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, light polypeptide 4 transcript_id : NM_010858.4

name	EG629959 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262545 GeneID:629959 MGI:3645610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 47 ESTs, 2 Proteins product : predicted gene, EG629959 transcript_id : XM_894949.3

name	Itgb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7949056 GeneID:16416 MGI:96612
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 3 transcript_id : NM_016780.1

name	LOC629960 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262456 GeneID:629960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical LOC629960 transcript_id : XM_906976.3

name	LOC666749 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262458 GeneID:666749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins product : similar to gamma-aminobutyric acid A receptor, epsilon transcript_id : XM_985773.2

name	LOC100041125 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262460 GeneID:100041125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001475841.1

name	4921510J17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486665 GeneID:70894 MGI:1918144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921510J17 gene transcript_id : NM_001081046.1

name	Mettl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60097934 GeneID:52686 MGI:1289171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase like 2 transcript_id : NM_172567.2

name	Tlk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803277 GeneID:24086 MGI:1346023
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tousled-like kinase 2 (Arabidopsis) transcript_id : NM_011903.2

name	Mrc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930719 GeneID:17534 MGI:107818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannose receptor, C type 2 transcript_id : NM_008626.3

name	Rnf190 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85986646 GeneID:632687 MGI:2443469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 190 transcript_id : NM_001039242.1

name	Lrrc37a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262453 GeneID:237954 MGI:2685097
definition	codon_start : 1 product : hypothetical protein protein_id : XP_137868.8

name	Gm884 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701939 GeneID:380730 MGI:2685730
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC380730 protein_id : NP_001028606.1

name	Lyzl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037161 CCDS:CCDS25519.1 GeneID:69444 MGI:1916694
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0003796 - lysozyme activity [Evidence IEA] GO_process : GO:0016998 - cell wall catabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : lysozyme-like protein 1; novel protein similar to lysozyme product : lysozyme-like 6 protein_id : NP_081359.1

name	Rprml (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701722 CCDS:CCDS25520.1 GeneID:104582 MGI:2144486
definition	codon_start : 1 product : reprimo-like protein_id : NP_001028384.1

name	Gosr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24528553 CCDS:CCDS25521.1 GeneID:56494 MGI:1927204
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IDA] codon_start : 1 note : golgi SNARE product : golgi SNAP receptor complex member 2 protein_id : NP_062624.2

name	Wnt9b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543962 CCDS:CCDS25522.1 GeneID:22412 MGI:1197020
definition	GO_function : GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : wingless-type MMTV integration site family, member 15; wingless-type MMTV integration site 15 product : wingless-type MMTV integration site 9B protein_id : NP_035849.2

name	Wnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678593 CCDS:CCDS25523.1 GeneID:22415 MGI:98955
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : wingless-related MMTV integration site 3 protein_id : NP_033547.1

name	Nsf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543349 CCDS:CCDS25524.1 GeneID:18195 MGI:104560
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IMP]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0019905 - syntaxin binding [Evidence IDA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : N-ethylmaleimide sensitive factor product : N-ethylmaleimide sensitive fusion protein protein_id : NP_032766.2

name	EG667631 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94390980 GeneID:667631 MGI:3644778
definition	codon_start : 1 product : similar to Zinc finger, CDGSH-type domain 1 protein_id : XP_001004030.1

name	Arf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671571 CCDS:CCDS25525.1 GeneID:11841 MGI:99595
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0015031 - protein transport [Evidence TAS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ADP-ribosylation factor 2 protein_id : NP_031503.1

name	LOC100042645 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262543 GeneID:100042645
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479595.1

name	Crhr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681013 CCDS:CCDS25526.1 GeneID:12921 MGI:88498
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015056 - corticotrophin-releasing factor receptor activity [Evidence IMP]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007610 - behavior [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0006950 - response to stress [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : CRF-R1alpha; CRF 1 receptor product : corticotropin releasing hormone receptor 1 protein_id : NP_031788.1

name	4933407P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126722669 GeneID:237958 MGI:3045264
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0008717 - D-alanyl-D-alanine endopeptidase activity [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; intramembrane protease 5; ortholog of human intramembrane protease 5 IMP5 product : intramembrane protease 5 isoform b protein_id : NP_001076004.1

name	4933407P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723606 GeneID:237958 MGI:3045264
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0008717 - D-alanyl-D-alanine endopeptidase activity [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; intramembrane protease 5; ortholog of human intramembrane protease 5 IMP5 product : intramembrane protease 5 isoform a protein_id : NP_950184.2

name	Mapt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370347 CCDS:CCDS25527.1 GeneID:17762 MGI:97180
definition	GO_component : GO:0030424 - axon [Evidence ISS] [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0030426 - growth cone [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence ISS] [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0045298 - tubulin [Evidence ISS] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS] GO_process : GO:0048699 - generation of neurons [Evidence ISS]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence ISS] [Evidence IEA]; GO:0045773 - positive regulation of axon extension [Evidence ISS]; GO:0031116 - positive regulation of microtubule polymerization [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : microtubule-associated protein tau isoform a protein_id : NP_001033698.1

name	Mapt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370355 CCDS:CCDS25528.1 GeneID:17762 MGI:97180
definition	GO_component : GO:0030424 - axon [Evidence ISS] [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0030426 - growth cone [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence ISS] [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0045298 - tubulin [Evidence ISS] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS] GO_process : GO:0048699 - generation of neurons [Evidence ISS]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence ISS] [Evidence IEA]; GO:0045773 - positive regulation of axon extension [Evidence ISS]; GO:0031116 - positive regulation of microtubule polymerization [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : microtubule-associated protein tau isoform b protein_id : NP_034968.3

name	1700081L11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486668 GeneID:76719 MGI:1923969
definition	codon_start : 1 product : hypothetical protein LOC76719 protein_id : NP_001074514.1

name	Cdc27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124378022 GeneID:217232 MGI:102685
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005876 - spindle microtubule [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0007091 - mitotic metaphase/anaphase transition [Evidence ISS] codon_start : 1 product : cell division cycle 27 homolog protein_id : NP_663411.2

name	EG629959 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82935391 GeneID:629959 MGI:3645610
definition	codon_start : 1 product : hypothetical protein protein_id : XP_900042.1

name	Myl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981605 CCDS:CCDS25535.1 GeneID:17896 MGI:97267
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : myosin light chain, alkali, cardiac atria; myosin, light polypeptide 4, alkali; atrial, embryonic product : myosin, light polypeptide 4 protein_id : NP_034988.2

name	Itgb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949057 CCDS:CCDS25536.1 GeneID:16416 MGI:96612
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005178 - integrin binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence IEA]; GO:0007044 - cell-substrate junction assembly [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IMP] codon_start : 1 exception : mismatches in translation note : integrin beta 3 (Cd61); platelet glycoprotein IIIa (GP3A); integrin beta 3 subunit; platelet gpIIIa; beta3 integrin; beta subunit of alpha V/beta 3; integrin beta3 subunit product : integrin beta 3 protein_id : NP_058060.1

name	LOC629960 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262457 GeneID:629960
definition	codon_start : 1 product : hypothetical protein protein_id : XP_912069.3

name	LOC666749 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262459 GeneID:666749
definition	codon_start : 1 product : hypothetical protein protein_id : XP_990867.2

name	LOC100041125 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262461 GeneID:100041125
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475891.1

name	4921510J17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486666 GeneID:70894 MGI:1918144
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70894 protein_id : NP_001074515.1

name	Mettl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60097935 CCDS:CCDS25538.1 GeneID:52686 MGI:1289171
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : methyltransferase like 2 protein_id : NP_766155.2

name	Tlk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755805 GeneID:24086 MGI:1346023
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS]; GO:0001672 - regulation of chromatin assembly or disassembly [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 function : serine/threonine kinase note : protein kinase U-alpha product : tousled-like kinase 2 protein_id : NP_036033.1

name	Mrc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930720 CCDS:CCDS25539.1 GeneID:17534 MGI:107818
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005518 - collagen binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence ISS] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 note : novel lectin product : mannose receptor, C type 2 protein_id : NP_032652.3

name	Rnf190 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986647 CCDS:CCDS25540.1 GeneID:632687 MGI:2443469
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 190 protein_id : NP_001034331.1

name	LOC666739 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666739
definition	number : 2 pseudo : _no_value

name	LOC666739 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666739
definition	number : 1 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 1 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 2 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 3 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 4 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 5 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 6 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 7 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 8 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 9 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 10 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 11 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 12 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 13 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 14 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 15 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 16 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 17 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 18 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 19 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 20 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 21 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 22 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 23 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 24 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 25 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 26 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 27 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 28 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 29 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 30 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 31 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 32 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 33 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 34 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 35 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 36 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 37 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 38 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 39 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 40 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 41 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 42 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 43 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 44 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 45 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 46 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 47 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 48 pseudo : _no_value

name	LOC632784 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:632784
definition	number : 49 pseudo : _no_value

name	LOC276809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:276809
definition	number : 2 pseudo : _no_value

name	LOC276809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:276809
definition	number : 1 pseudo : _no_value

name	LOC666771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666771
definition	number : 3 pseudo : _no_value

name	LOC666771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666771
definition	number : 2 pseudo : _no_value

name	LOC666771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666771
definition	number : 1 pseudo : _no_value

name	LOC666721 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262544 GeneID:666721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 210 ESTs, 2 Proteins product : similar to High mobility group nucleosomal binding domain 1 pseudo : _no_value transcript_id : XR_034295.1

name	1700052K11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262462 GeneID:73431 MGI:1920681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 22 ESTs product : RIKEN cDNA 1700052K11 gene transcript_id : XR_035285.1

clone name	MSMg01-138H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326J21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-467M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345J18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-390G12.T7 (MSMg01no390_g12.b1)	MSMg01-390G12.TJ (MSMg01no390_g12.g1)
ACC	AG492425	AG492426
length	746	748
length of high quality (start - end)	442 (80 - 521)	519 (82 - 600)
definition	CHROMAT_FILE: MSMg01no390_g12.b1 PHD_FILE: MSMg01no390_g12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:34:19 2005	CHROMAT_FILE: MSMg01no390_g12.g1 PHD_FILE: MSMg01no390_g12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:34:19 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNCCCCTCATAATTTGCGGCGCTATACGAATACTATATCCACACCACCGC GGAATTCATATATATTTCACCAACCTCTCTTTTGTTTTCTTTGAGATAGT ATAGCCCAGGCTGTACATTGCCAAATACTGACTTTAAAAACAAAAAAAAA AAAACAAAAAAAAACAAAACTATTTGCTCATGTCCAAATCATTACCCCAC CCCCTCTCCTTTCTGAATTCCAGGGATAGAACTCAAATTGTCAAGTGTGG TGGCAAGTACCTTTCCTTGCTGTCTCTCAAGTCACATTCACTCTTCTTTC ACTCACTCACTCGGAGACAGCTTATTTTAAAACTCAGGATTCTTTTGCCC ATTCTCTTGGGTACTGGAATTATAGGCATGTACCACCATGCCAGGCTGGT TATTATTTTTTAAAATTGATGTGTGACTATAATTCATGTCATATCACCTT TCAAAATGCATAATAGGGGCTAGCGAGGTAGCTCAGTGGGCAAAGGCATT TATTCCTAAGCCTAAATGGCCTGAGTTTGATTCCCCAGGATCTACGTGGA GGAGATCCAAATCCTGCAAACAATTGCCCTTTGATCTCAACACACATCCA CAAATCCCTCTGCCTTAGCAAATAAATGTTTAAAACACAGTTAATTTTTA TTTAACAAGTTTTATAACTCTGCAACAATTGCAAAGTCCAACAAAATCAC CCACGGTCTCAAAAAATTTCCCAATTTTAAAAAAACCCCTAATCCC	NNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCAGGTTTCTCTTTGAA GGTCAGAGAATTGCTGATAATCATACTCCGAAAGAACTGGGAATGGAGGA AGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCACTCGACGG TTTAGATAATTCTTTTTATTTTTTATTTTTCCTTTCCCTCAATCCTTTTT TATTTTTAAAAATAGTTCTTTTGCAATGTGGTGTTCAAAATGAAAATTGA ATACTGGCACTCCATCTCTTAGAACATATTTTTTCTAGTGTTCAATATTC ATTATTGGTTGTTTTTGTTGTGCTGATTTTTGGTGATCAGACCTCAGCTC CCTTAATACTGCCCTTTTTCCTTTAAAAGATTTCATGTGTGCACAGAGAG GCCACCCTTTTCAGGACTGTGCATTTTCAGGTTTGTGATGATAAAAAGAT CGACCAATGGGAGCTTTCCTATGACCTTTCAATTGGCTCTGAAGTTCCAG CATGTGGTTGCTTCACTCCTGGACTGTGATTTTCAGTGGGAGATGGAAAT TTTTCAGAGAACTGAACTGTGAAAAATGACCTTTTCCTCAGCTTGAAGCT ACTTTTTAAAATCTTGTGTTCTGGACCAAAAGAAGAACCTTCTTGTTTGT AGCCCAGATTAAAGAAACGGTGAGAGCCTACTGCTTACTCCCAAGGGG
quality values	Open. Hide. 0 0 3 7 6 8 8 8 7 7 7 9 9 10 21 23 27 22 28 28 28 22 27 18 16 16 17 9 7 7 6 10 10 12 19 16 13 12 8 8 8 8 8 8 9 9 10 9 11 11 11 11 21 23 23 31 24 24 28 37 29 29 9 9 11 12 11 12 10 9 9 9 9 9 12 15 18 22 20 24 23 27 27 48 57 57 34 34 30 32 32 27 27 50 53 53 53 53 53 57 53 68 48 48 28 28 25 12 12 34 18 25 28 43 43 33 33 37 43 32 34 22 31 31 39 39 48 48 48 39 39 35 35 34 41 41 47 59 25 25 11 11 11 25 30 59 59 59 59 59 59 59 36 36 33 33 34 36 59 59 59 59 57 48 42 42 48 48 48 42 42 48 48 59 59 43 43 43 46 46 46 48 48 53 50 50 50 51 53 48 48 50 57 59 68 59 59 44 43 43 59 59 59 48 48 48 48 48 59 57 57 57 57 48 47 47 57 57 57 57 57 43 37 50 50 50 50 35 35 32 41 32 43 44 57 57 57 57 57 57 57 43 57 44 57 57 57 57 57 57 57 57 57 57 57 46 48 54 57 59 59 68 68 68 68 68 59 59 59 59 59 57 59 48 59 48 54 54 48 47 48 57 54 57 57 57 57 57 57 57 57 57 59 59 59 68 59 50 48 48 47 47 47 48 48 48 57 48 48 43 39 47 39 39 39 39 39 37 37 41 23 23 16 15 15 14 14 15 18 17 18 28 30 28 39 37 35 35 37 39 41 47 47 47 44 44 44 30 35 37 37 37 37 41 41 41 34 30 34 34 57 47 43 43 57 46 57 57 57 57 57 57 57 53 53 53 48 50 50 57 59 43 43 42 43 43 57 46 57 54 46 46 43 43 48 59 68 68 68 68 59 59 47 54 54 59 59 59 68 68 68 68 68 59 57 57 57 57 37 37 28 28 28 33 33 44 44 57 57 59 59 59 57 57 44 36 36 36 44 28 37 37 37 37 28 29 29 37 41 43 46 36 36 33 43 40 48 48 48 48 47 47 31 31 20 34 34 40 37 30 37 28 43 36 43 39 36 28 34 32 32 18 25 23 11 11 23 18 26 25 22 24 28 33 32 32 23 23 32 34 39 41 41 41 37 32 28 25 14 15 13 14 21 24 36 28 34 24 21 17 12 21 21 11 11 12 27 23 23 17 11 9 11 14 14 11 14 12 17 10 12 12 18 18 14 14 20 16 16 11 11 11 9 9 9 10 10 16 16 20 20 27 28 28 28 14 9 8 9 6 6 10 17 18 28 35 25 25 20 19 19 17 17 17 17 18 22 12 10 10 10 10 10 11 12 12 13 9 9 9 13 11 29 24 32 18 21 15 18 18 18 17 14 14 11 12 9 9 9 9 16 9 9 7 10 8 8 8 8 11 13 9 8 8 10 8 10 10 10 10 9 8 8 8 9 10 11 13 15 10 10 10 8 6 6 8 6 6 8 9 9 9 9 9 11 8 8 8 8 8 8 9 10 10 11 11 11 10 8 9 10 10 9 8 9 12 8 10 13 11 9 9 9 13 12 8 8 7 8 7 8 8 8 8 8 9 10 8 8 8 8 9 12 17 11 9 8 8 8 8 8 10 7 6 6 6 7 10 9 11 22 30 16 14 13 12 10 13 10 8 8 8 8 10 8 8	Open. Hide. 0 0 0 3 7 6 7 10 10 10 9 9 9 9 15 21 39 40 41 41 37 32 39 29 27 29 25 25 31 37 31 32 26 26 14 23 11 9 9 9 9 9 9 12 9 10 10 23 19 34 28 35 39 39 47 47 39 39 39 44 59 59 59 34 23 14 9 9 9 9 9 15 18 18 24 19 22 29 29 33 33 33 36 36 48 53 53 57 59 59 59 57 57 57 57 57 59 57 57 68 68 68 68 68 68 68 68 51 51 50 50 50 50 68 68 68 68 68 51 50 50 50 50 57 57 57 57 57 57 57 57 57 57 68 57 57 68 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 48 42 41 42 41 48 48 46 46 46 48 57 68 68 68 68 68 68 68 68 57 57 57 52 52 52 52 52 52 52 52 59 59 68 68 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 44 43 43 44 43 48 57 68 68 68 68 68 68 68 68 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 30 30 22 22 11 12 11 12 12 15 22 26 32 34 41 41 59 59 50 53 50 57 57 57 59 57 57 57 57 57 57 59 57 57 57 57 57 57 59 59 59 68 68 68 59 59 59 57 57 59 59 68 68 68 68 68 68 68 59 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 54 54 54 57 57 57 57 57 54 54 54 57 59 59 59 59 48 48 48 57 57 68 68 68 68 57 57 48 48 48 57 57 68 68 54 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 57 53 53 50 50 50 57 59 59 59 59 57 50 50 50 50 50 41 41 41 41 41 41 37 41 44 44 44 47 42 50 50 50 50 42 47 44 44 44 37 37 39 37 37 30 28 27 26 26 28 31 34 34 34 34 36 34 34 44 44 41 41 40 40 40 40 41 41 41 35 31 31 31 37 39 39 34 34 23 23 23 34 32 34 39 24 20 22 21 21 19 28 30 37 32 37 39 39 35 30 14 9 9 9 9 11 15 24 33 25 29 30 24 22 20 22 27 17 15 12 11 11 12 16 17 22 21 21 16 10 10 10 10 10 12 13 10 10 11 11 10 11 12 13 20 20 15 23 14 8 8 9 8 8 8 8 8 8 13 9 8 8 8 10 16 25 28 22 14 17 19 8 8 8 8 6 8 6 6 9 10 10 10 10 8 8 8 9 9 19 12 15 13 13 25 16 16 10 9 9 9 9 9 8 8 8 8 6 6 8 9 9 15 11 11 10 10 10 10 10 9 9 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 11 10 10 10 10 8 8 8 8 8 8 8 8 8 12 9 11 12 15 12

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no390_g12.b1 MSMg01no390_g12.b1 CHROMAT_FILE:
MSMg01no390_g12.b1 PHD_FILE: MSMg01no390_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:19 2005
         (442 letters)



>mm_chr11_104268743_104269584
          Length = 842

 Score =  818 bits (423), Expect = 0.0
 Identities = 438/443 (98%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttgttttctttgagatagtatagcccaggctgtacattgccaaatactgactttaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttttgttttctttgagatagtatagcccaggctgtacattgccaaatactgactttaaaa 618

                                                                       
Query: 61  ac-aaaaaaaaaaaaacaaaaaaaaacaaaactatttgctcatgtccaaatcattacccc 119
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 acaaaaaaaaaaaaaacaaaaaaaaacaaaactatttgctcatgtccaaatcattacccc 558

                                                                       
Query: 120 accccctctcctttctgaattccagggatagaactcaaattgtcaagtgtggtggcaagt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 accccctctcctttctgaattccagggatagaactcaaattgtcaagtgtggtggcaagt 498

                                                                       
Query: 180 acctttccttgctgtctctcaagtcacattcactcttctttcactcactcactcggagac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acctttccttgctgtctctcaagtcacattcactcttctttcactcactcactcggagac 438

                                                                       
Query: 240 agcttattttaaaactcaggattcttttgcccattctcttgggtactggaattataggca 299
           ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agcttagcctaaaactcaggattcttttgcccattctcttgggtactggaattataggca 378

                                                                       
Query: 300 tgtaccaccatgccaggctggttattattttttaaaattgatgtgtgactataattcatg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtaccaccatgccaggctggttattattttttaaaattgatgtgtgactataattcatg 318

                                                                       
Query: 360 tcatatcacctttcaaaatgcataataggggctagcgaggtagctcagtgggcaaaggca 419
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 317 tcatatcacctttcaaaatgcataataggggctagcgaggtatctcagtgggcaaaggca 258

                                  
Query: 420 tttattcctaagcctaaatggcc 442
           |||||||||||||||||||||||
Sbjct: 257 tttattcctaagcctaaatggcc 235


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information