Query= MSMg01no392_b21.b1 MSMg01no392_b21.b1 CHROMAT_FILE:
MSMg01no392_b21.b1 PHD_FILE: MSMg01no392_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:32 2005
(450 letters)
>mm_chr11_5234379_5235227
Length = 849
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 1/447 (0%)
Strand = Plus / Minus
Query: 4 gaattcttgtcttctcttgtctcggtcagtcttttctagataataaacaccacctgcttt 63
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaatt-ttgtctcctcttgtctcggtcagtcttttctagataataaacaccacctgcttt 591
Query: 64 cagtatcaactgggtgtggtcaggactgttgcttctgcatggtagaatcacaatcatgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cagtatcaactgggtgtggtcaggactgttgcttctgcatggtagaatcacaatcatgga 531
Query: 124 caaggcatttgctctgaaggttgaactgtgtcatagaaccaacatctggtactgctcctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 caaggcatttgctctgaaggttgaactgtgtcatagaaccaacatctggtactgctcctc 471
Query: 184 ctcaccacataagcagcttcctctccagatctctttatagacctgttttatctccctgcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctcaccacataagcagcttcctctccagatctctttatagacctgttttatctccctgcc 411
Query: 244 cctagctactcaggagatataacctccatattcctggttttgagtctaaaaagattccag 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cctacctactcaggagatataacctccatattcctggttttgagtctaaaaagattccag 351
Query: 304 gaaagggattcattgactcattttgagtcaggcactcttctttaggcttaccagttatgt 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 350 gaaagggattcattgactcattttgagtcaggcactcttctttaggcttaccagttgtgt 291
Query: 364 tatggggctgaagactctatgaaactaagcctgtctcaccttgtcatgtgtgagggtagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tatggggctgaagactctatgaaactaagcctgtctcaccttgtcatgtgtgagggtagg 231
Query: 424 aagaaaatgtgttcttcagaaaggggt 450
|||||||||||||||||||||||||||
Sbjct: 230 aagaaaatgtgttcttcagaaaggggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 849
Length adjustment: 10
Effective length of query: 440
Effective length of database: 839
Effective search space: 369160
Effective search space used: 369160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_b21.g1 MSMg01no392_b21.g1 CHROMAT_FILE:
MSMg01no392_b21.g1 PHD_FILE: MSMg01no392_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:33 2005
(248 letters)
>mm_chr11_5048604_5049251
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 agtccaccctggctccgcattgtccccaagtcccgctgcttcagtccttcactctgctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtccaccctggctccgcattgtccccaagtcccgctgcttcagtccttcactctgctca 260
Query: 61 cacctcttgagcgttcttgtggccaagctgccccttctcccactttgatctttagaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacctcttgagcgttcttgtggccaagctgccccttctcccactttgatctttagaatct 320
Query: 121 atttacagagctccaccccctcactctggcaacttctatgcatcctttgggtcttaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttacagagctccaccccctcactctggcaacttctatgcatcctttgggtcttaacct 380
Query: 181 caaggtccacacaggcacagcagctctgagccatattctctcccacaagtgaggggaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaggtccacacaggcacagcagctctgagccatattctctcccacaagtgaggggaaga 440
Query: 241 gagcctaa 248
||||||||
Sbjct: 441 gagcctaa 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
