Query= MSMg01no393_e18.b1 MSMg01no393_e18.b1 CHROMAT_FILE:
MSMg01no393_e18.b1 PHD_FILE: MSMg01no393_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:11 2005
(502 letters)
>mm_chr11_22678949_22679850
Length = 902
Score = 874 bits (452), Expect = 0.0
Identities = 485/496 (97%)
Strand = Plus / Plus
Query: 7 gaattcaataaatgctggctgtaattatttattattcctatatacaatgaaaccaccaac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaataaatgctggctgtaattatttattattcctatatacaatgaaaccaccaac 266
Query: 67 atcatatcaacagagacaagagtttaaaaagaccagagataaaacacagactcacttgca 126
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 267 atcatatcaacagagacaagcgtttaaaaagaccagagctaaaacacagactcacctgca 326
Query: 127 gccacctcaccaccttgtgtcctggttggaaccaaacacatcatggcaaaatttgattta 186
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 327 gccacctcaccaccttgtgtcctggttagaaccaaacacatcatggcaaaatttgattta 386
Query: 187 gtgcttttctagtgaaaaggcatgcttatgaataatagttcagaaacagaggaacaaaga 246
||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct: 387 gtgcttttctagtgaaagggcatgcttatgaataattgttcagaagtggaggaacaaagg 446
Query: 247 acaaacagtcactgtgcatttaatgcattttgacatgtagcagcctgggatatcttcaga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 acaaacagtcactgtgcatttaatgcattttgacatgtagcagcctgggatatcttcaga 506
Query: 307 acagcacagagggcagcttgatgtcaccatcttagaactttctcctccaggaagggtttt 366
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 507 acagcacagagggcagcttgatgtcagcatcttagaactttctcctccaggaagggtttt 566
Query: 367 tctgcagtagcttccttgaagacaaaggaacacaacactccactgttcttgggtttcttc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctgcagtagcttccttgaagacaaaggaacacaacactccactgttcttgggtttcttc 626
Query: 427 aaaaagcactgtcaaaaaccaatagcatccagggtaataattttaggaggcactttcttg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaaaagcactgtcaaaaaccaatagcatccagggtaataattttaggaggcactttcttg 686
Query: 487 ctgctagtcctggaag 502
||||||||||||||||
Sbjct: 687 ctgctagtcctggaag 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_e18.g1 MSMg01no393_e18.g1 CHROMAT_FILE:
MSMg01no393_e18.g1 PHD_FILE: MSMg01no393_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:11 2005
(412 letters)
>mm_chr11_22832869_22833679
Length = 811
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%), Gaps = 1/412 (0%)
Strand = Plus / Minus
Query: 1 cactaggtaaagggagtgaaaaggacctctgtgatgttcggtattgttaatttgattgga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 611 cactaggtaaagggagtgaaaaggacctttgtgatgttcggtattgttaatttgattgga 552
Query: 61 ttaaaaaatgtcagagggctagagttgtagcagttggtagagtacttgcctgcctatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 551 ttaaaaaatgtcagagggctagagttgtagcagttggtagagtacttgcttgcctatctt 492
Query: 121 atatcaaagcctgggatgctgcccagcatggtgccagggccatttctaactgtgactgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atatcaaagcctgggatgctgcccagcatggtgccagggccatttctaactgtgactgtg 432
Query: 181 agggaatggagaaaagatggacagacaaaatgctgggatccagtggtctgtgctggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agggaatggagaaaagatggacagacaaaatgctgggatccagtggtctgtgctggagaa 372
Query: 241 acctccacatccaggaagctcagcatgtttactacatgttaaatacaagggcaaggtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 acctccacatccaggaagctcagcatgtttactacatgttaaatacaagggcaaggtttt 312
Query: 301 tgcacatattgaacaaggaggtatgcttattatgtccacataaatcaggcagaggttgtg 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 tgcacatattgaacaaggaggtatgcttattatgtccagataaatcaggcagaggttgtg 252
Query: 361 gtgcacatctgcatcaaggaggcaggtttaactaatctcagtaggagttgtc 412
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 251 gtgcacatctgcatcaaggaggcagg-ttaactaatctcagtaggagttgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 811
Length adjustment: 9
Effective length of query: 403
Effective length of database: 802
Effective search space: 323206
Effective search space used: 323206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
