MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-393K08
Chromosome	11 (Build37)
Map Location	88,548,676 - 88,549,138
singlet/doublet	singlet
Overlap gene	LOC100038945
Upstream gene	Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
Downstream gene	Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rnf43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207742 MGI:2442609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Supt4h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20922 MGI:107416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bzrap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207777 MGI:2450877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17523 MGI:97137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76113 MGI:1923363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mks1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380718 MGI:3584243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13861 MGI:107569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258406 MGI:3030296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr463 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258408 MGI:3030297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr464 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258407 MGI:3030298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dynll2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68097 MGI:1915347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vezf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22344 MGI:1313291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cuedc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103841 MGI:2144281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrps23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64656 MGI:1928138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700106J16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74297 MGI:1921547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs

name	LOC668793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Msi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76626 MGI:1923876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038945 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins

name	Akap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Scpep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74617 MGI:1921867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000001305 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217066 MGI:3651308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	2210409E12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72381 MGI:1919631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Coil (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12812 MGI:104842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039051 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Trim25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217069 MGI:102749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dgke (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56077 MGI:1889276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930013B10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414094 MGI:3041185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Gm525 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217071 MGI:2685371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039114 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nog (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18121 MGI:104327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039047 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	4932411E22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214604 MGI:3045332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankfn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382543 MGI:2686021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802131 GeneID:207742 MGI:2442609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 43 transcript_id : NM_172448.2

name	Supt4h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678180 GeneID:20922 MGI:107416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of Ty 4 homolog 1 (S. cerevisiae) transcript_id : NM_009296.1

name	Bzrap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369600 GeneID:207777 MGI:2450877
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : benzodiazapine receptor associated protein 1 transcript_id : NM_172449.1

name	Mpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754731 GeneID:17523 MGI:97137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myeloperoxidase transcript_id : NM_010824.1

name	Lpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17975592 GeneID:76113 MGI:1923363
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactoperoxidase transcript_id : NM_080420.1

name	Mks1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89199234 GeneID:380718 MGI:3584243
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Meckel syndrome, type 1 transcript_id : NM_001039684.1

name	Epx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679674 GeneID:13861 MGI:107569
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eosinophil peroxidase transcript_id : NM_007946.1

name	Olfr462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239009 GeneID:258406 MGI:3030296
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 462 transcript_id : NM_146411.1

name	Olfr463 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239013 GeneID:258408 MGI:3030297
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 463 transcript_id : NM_146413.1

name	Olfr464 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239007 GeneID:258407 MGI:3030298
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 464 transcript_id : NM_146412.1

name	Dynll2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802589 GeneID:68097 MGI:1915347
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein light chain LC8-type 2 transcript_id : NM_026556.3

name	Sfrs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118582270 GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 1 (ASF/SF2) transcript_id : NM_001078167.1

name	Sfrs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598842 GeneID:110809 MGI:98283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 1 (ASF/SF2) transcript_id : NM_173374.3

name	Vezf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414175 GeneID:22344 MGI:1313291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vascular endothelial zinc finger 1 transcript_id : NM_016686.3

name	Cuedc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574103 GeneID:103841 MGI:2144281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CUE domain containing 1 transcript_id : NM_198013.1

name	Mrps23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130310 GeneID:64656 MGI:1928138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S23 transcript_id : NM_024174.5

name	1700106J16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94390265 GeneID:74297 MGI:1921547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs product : RIKEN cDNA 1700106J16 gene transcript_id : XM_484061.3

name	Msi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286824 GeneID:76626 MGI:1923876
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Musashi homolog 2 (Drosophila) transcript_id : NM_054043.3

name	LOC100038945 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262367 GeneID:100038945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 2 Proteins product : similar to Musashi homolog 2 (Drosophila) transcript_id : XM_001471946.1

name	Akap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347476 GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 1 transcript_id : NM_001042541.1

name	Akap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347488 GeneID:11640 MGI:104729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 1 transcript_id : NM_009648.2

name	Scpep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982616 GeneID:74617 MGI:1921867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine carboxypeptidase 1 transcript_id : NM_029023.2

name	Coil (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053928 GeneID:12812 MGI:104842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coilin transcript_id : NM_016706.2

name	LOC100039051 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262372 GeneID:100039051
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039051 transcript_id : XM_001472257.1

name	Trim25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849790 GeneID:217069 MGI:102749
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 25 transcript_id : NM_009546.1

name	Dgke (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126432551 GeneID:56077 MGI:1889276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, epsilon transcript_id : NM_019505.3

name	Gm525 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126366077 GeneID:217071 MGI:2685371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 525, (NCBI) transcript_id : NM_001033266.2

name	LOC100039114 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262374 GeneID:100039114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039114 transcript_id : XM_001472509.1

name	Nog (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7110674 GeneID:18121 MGI:104327
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : noggin transcript_id : NM_008711.1

name	LOC100039047 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262370 GeneID:100039047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : hypothetical protein LOC100039047 transcript_id : XM_001472161.1

name	4932411E22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803578 GeneID:214604 MGI:3045332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932411E22 gene transcript_id : NM_172534.2

name	Ankfn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286855 GeneID:382543 MGI:2686021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin-repeat and fibronectin type III domain containing 1 transcript_id : NM_001080933.1

name	Supt4h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678181 GeneID:20922 MGI:107416
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008159 - positive transcription elongation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IEA] codon_start : 1 product : suppressor of Ty 4 homolog 1 protein_id : NP_033322.1

name	Bzrap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369601 GeneID:207777 MGI:2450877
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : peripheral-type benzodiazepine receptor-associated protein 1 product : benzodiazapine receptor associated protein 1 protein_id : NP_766037.1

name	Mpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754732 CCDS:CCDS25217.1 GeneID:17523 MGI:97137
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IDA] GO_process : GO:0042744 - hydrogen peroxide catabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation product : myeloperoxidase protein_id : NP_034954.1

name	Lpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17975593 CCDS:CCDS25218.1 GeneID:76113 MGI:1923363
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : lactoperoxidase protein_id : NP_536345.1

name	Mks1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89199235 GeneID:380718 MGI:3584243
definition	codon_start : 1 exception : mismatches in translation note : FABB proteome-like product : Meckel syndrome, type 1 protein_id : NP_001034773.1

name	Epx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679675 CCDS:CCDS25220.1 GeneID:13861 MGI:107569
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA] GO_process : GO:0042744 - hydrogen peroxide catabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation product : eosinophil peroxidase protein_id : NP_031972.1

name	Olfr462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239010 CCDS:CCDS25221.1 GeneID:258406 MGI:3030296
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9536824-9535889; olfactory receptor MOR240-3 product : olfactory receptor 462 protein_id : NP_666523.1

name	Olfr463 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239014 CCDS:CCDS25222.1 GeneID:258408 MGI:3030297
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9540823-9539888; olfactory receptor MOR240-1 product : olfactory receptor 463 protein_id : NP_666525.1

name	Olfr464 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239008 CCDS:CCDS25223.1 GeneID:258407 MGI:3030298
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2PAEV-9555122-9554181; olfactory receptor MOR240-2 product : olfactory receptor 464 protein_id : NP_666524.1

name	Dynll2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18087731 GeneID:68097 MGI:1915347
definition	GO_component : GO:0030286 - dynein complex [Evidence NAS] [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0016459 - myosin [Evidence IDA] GO_function : GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0046907 - intracellular transport [Evidence NAS] codon_start : 1 product : dynein light chain 2 protein_id : NP_080832.1

name	Sfrs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328400 GeneID:110809 MGI:98283
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006376 - mRNA splice site selection [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : splicing factor, arginine/serine-rich 1 isoform 1 protein_id : NP_775550.2

name	Sfrs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118582271 GeneID:110809 MGI:98283
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006376 - mRNA splice site selection [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : splicing factor, arginine/serine-rich 1 isoform 2 protein_id : NP_001071635.1

name	Vezf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414176 GeneID:22344 MGI:1313291
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0001885 - endothelial cell development [Evidence IMP] codon_start : 1 product : vascular endothelial zinc finger 1 protein_id : NP_057895.2

name	Cuedc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574104 CCDS:CCDS25226.1 GeneID:103841 MGI:2144281
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : CUE domain containing 1 protein_id : NP_932130.1

name	Mrps23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27228982 CCDS:CCDS25227.1 GeneID:64656 MGI:1928138
definition	GO_component : GO:0005763 - mitochondrial small ribosomal subunit [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] codon_start : 1 product : mitochondrial ribosomal protein S23 protein_id : NP_077136.2

name	1700106J16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51828639 GeneID:74297 MGI:1921547
definition	codon_start : 1 product : hypothetical protein LOC74297 protein_id : XP_484061.1

name	Msi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157989 GeneID:76626 MGI:1923876
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005844 - polysome [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008266 - poly(U) binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : Musashi2 product : Musashi homolog 2 protein_id : NP_473384.1

name	LOC100038945 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262368 GeneID:100038945
definition	codon_start : 1 product : similar to Musashi homolog 2 (Drosophila) protein_id : XP_001471996.1

name	Akap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347477 GeneID:11640 MGI:104729
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : A kinase anchor protein product : A-kinase anchor protein 1 protein_id : NP_001036006.1

name	Akap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347489 CCDS:CCDS25229.1 GeneID:11640 MGI:104729
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : A kinase anchor protein product : A-kinase anchor protein 1 protein_id : NP_033778.2

name	Scpep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982617 CCDS:CCDS25230.1 GeneID:74617 MGI:1921867
definition	GO_function : GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : retinoid-inducible serine caroboxypetidase; retinoid-inducible serine caroboxypeptidase; serine caroboxypeptidase 1 product : serine carboxypeptidase 1 protein_id : NP_083299.2

name	Coil (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053929 GeneID:12812 MGI:104842
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0001674 - female germ cell nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : nuclear phosphoprotein of Cajal body; p80 Coilin product : coilin protein_id : NP_057915.2

name	LOC100039051 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262373 GeneID:100039051
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472307.1

name	Trim25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849791 GeneID:217069 MGI:102749
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : estrogen-responsive finger protein; zinc finger protein 147 product : tripartite motif protein 25 protein_id : NP_033572.1

name	Dgke (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506541 CCDS:CCDS25234.1 GeneID:56077 MGI:1889276
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, epsilon protein_id : NP_062378.1

name	Gm525 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701760 GeneID:217071 MGI:2685371
definition	codon_start : 1 note : novel transcript product : hypothetical protein LOC217071 protein_id : NP_001028438.1

name	LOC100039114 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262375 GeneID:100039114
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472559.1

name	Nog (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110675 CCDS:CCDS25236.1 GeneID:18121 MGI:104327
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_process : GO:0030509 - BMP signaling pathway [Evidence IDA]; GO:0007420 - brain development [Evidence IMP]; GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0045596 - negative regulation of cell differentiation [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP]; GO:0001657 - ureteric bud development [Evidence IDA] codon_start : 1 product : noggin protein_id : NP_032737.1

name	LOC100039047 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262371 GeneID:100039047
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472211.1

name	4932411E22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369752 CCDS:CCDS25237.1 GeneID:214604 MGI:3045332
definition	codon_start : 1 product : hypothetical protein LOC214604 protein_id : NP_766122.1

name	Ankfn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286856 GeneID:382543 MGI:2686021
definition	codon_start : 1 product : ankyrin-repeat and fibronectin type III domain containing 1 protein_id : NP_001074402.1

name	LOC668793 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668793
definition	number : 1 pseudo : _no_value

name	OTTMUSG00000001305 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262364 GeneID:217066 MGI:3651308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000001305 pseudo : _no_value transcript_id : XR_035754.1

name	2210409E12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:134053860 GeneID:72381 MGI:1919631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210409E12 gene pseudo : _no_value transcript_id : NR_003492.1

name	A930013B10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262369 GeneID:414094 MGI:3041185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA A930013B10 gene transcript_id : XR_035174.1

clone name	MSMg01-502F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-307D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-393K08.T7 (MSMg01no393_k08.b1)	MSMg01-393K08.TJ (MSMg01no393_k08.g1)
ACC	AG494891	AG494892
length	736	1,683
length of high quality (start - end)	463 (68 - 530)	---
definition	CHROMAT_FILE: MSMg01no393_k08.b1 PHD_FILE: MSMg01no393_k08.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:38:40 2005	CHROMAT_FILE: MSMg01no393_k08.g1 PHD_FILE: MSMg01no393_k08.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:38:40 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGCGCGGAATTCA CAGCACATTCCTGACTTTTATATTTCTACAAGCACAGCAGCAACACTTAA CTTTCAGTAGATAATTTCCCTTTAATCAGGGCCTCAGTCAAGCCCTGGCC AACTGACCCCATCAGACGGCCCCTCTAAAGCCTTGTCTGCCAGGCCGCGG AGGGACGGGGAGAGCCGGGAAGAGGGCAGCAGAGTCTGACAAGCCAACCT TTTACTGAAAAAAATAAATAGTTCATTTTGAATAAAAGTCTAATTCAGCG TGTTCAGGAAAGCCACGTCCTACGATGGATGGATCTGTAGGTGTCGGGGA CAGCTTGTAAGCTTGGAGCCAAGTGCTAGAGGCACCAACACAGGACCAGA ATAATGTCACTAATGTCACTATAGTAAAAGAAGGTCCTGCCCTGAAACGC TGCAGAGATGGGAACACGAGCCCAGGACATGGTTGTTTCCACCCTACCTT TCCTCTCCCTTAAGCAACAGAGCAAGGGGGGTGGGGGGCTGGGCGGTTGT TCTATTAACCCCTTTTATTTTTAGTGTACTTTATTGTTCTTCTGATGCTA CCCGTACTTTGGATTGCGTTTCATGTGCGTACCCACTAATCGCCTTTCAT TTGACATTTTCAATAACACGCCTATACCCCATTGCCTATTCCATCCTCAT AACTATTTTATGATATTCCTTCCATCCTATTATTCG	ATTATATATGATATTANCTCCCTCTACGTNCTATATGGAGTATATTCAGG TGCTCTGATATGTCACACGTAGCTCGTTGNCAGGATCTCGTAGATACTGC ATCGCCGTGTACCGCGCCTGTATACACAGTACTGCAAGCACAANGCANNA CANCAACAATCTACACACTACACCCAGGCCCCACAACTACTATTGTTACT ATACTACACACACTCTCTGTTNACTTATACTAACTCATATATACTAGATA TTACACTATTATCGCGCTACCATATCAGACTACTGATACTTGCATAACTA CTGATATATNCATCATATATTTATTCACTANACGTCGCGCTTCCGCGCAC TCCTCAACTCGCTCGACCGTACGCTCTGCCACCTCNGCGATATATATGAT CTACAGTCATCNCTGCACGCCTGAGTCTACTGTGCTGCCGCGCACCGNCC GCNCAACGCAACACACCCACATGGTATACAGNCGACATCCGCTACCTACA AATANGCTATGCNATATATATCAGAGCTGTAATATATACAGTCTATCTAG TATTACTCGTATCACATATTAGATCTTGATGATATAACATAAATAGACTC CAAGACACAAGCACAGTGACACACATTCTACAGTATATCTGTTAATATAA TGNATACGATATATCGTNATGATATCGAATCTATCTGACGGNGTATATAT CATTTATTTCTTCGATAGACTAGCTATATACACTATACGCGATAGAGGTA TAGTAACCATACAAGACGCGATCATCACACGCGACACTACGATATCGATT ATCGCGTCTCATTCTTCTCACGATTAAGACAATATATCACTCTACGCGCA CTCGTTACGTACCGATCACTATATAACGTATCACTNGTATAACACTCGCT ATACATCACGCGCTACTGAATACGCTATCGAATCGTACTGTGTCAGACAA ACCGTGAGAATGTATGTCATACACACATCTCGGTTAGANTGAGATTACAC TCTCTTCAGCATACATCGGCAACGAGTAGTATTATGACNTCATTGTATTA ATATATATATCACANCAGATTATCGTTCCATGTATGTCTCGCGCTACNCN CAGTATTATAATCGCTACTATCGTCATTCGATCACATGTATACGTATCGC TCATTCTGATACTCACACTNTCTCTATCTCTNCACTACTCTCTTACTCTA TATCTCTACTCTATTCATCACTGCGATACTATCATTCTANCACGCTNATA CTACTNTNANACACTNATACATCGTACTCTNGTTACGTGTTATAGCGCGA GTAGTGTTTGTANTATCTNTTAATGTAGCGATGATATACTCATGTGTGCA CGTCGCATGACTGTATANAGCATACACATTGTCATATCATGTTATGACGT ACATGATTACGATAACGCGCTAACTACGACATTGTNCTGCGACATATNGA TATGTATGCAGCTCACGCGACTAGGATCGTCACACACTGTCCGAGCCAAT ACTAATGTCGNATAANCGCTGTCGTCGCATCACGCTACGATCTCAGTCGA CGCGCTCACTCACGCTCATCTGTTNCANATTATTCNGCGTAGTCCACCGC GCGAGCATCGTATACATACCACGCAATTACGTATACNGTATCGTCCCTGC GTACTATGACANTCAGTGAGANTCATCATCACN
quality values	Open. Hide. 12 12 16 16 11 11 11 9 9 11 21 9 8 8 8 10 19 21 17 12 9 19 16 23 21 23 9 9 9 9 9 9 9 9 9 8 10 7 7 7 17 19 39 30 31 31 31 44 39 31 31 29 21 13 9 9 9 9 10 12 25 19 21 13 13 13 15 15 23 32 39 44 50 53 53 53 35 35 37 37 37 42 53 53 53 53 57 57 57 57 68 54 50 50 50 50 68 68 68 68 68 68 50 50 50 50 47 51 54 48 48 48 57 57 57 57 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 47 47 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 52 52 52 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 68 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 43 34 38 22 27 27 22 15 13 15 24 38 44 57 68 68 68 57 57 57 57 57 59 59 59 59 59 59 68 59 59 57 57 57 57 57 57 57 52 52 52 57 43 43 23 27 27 43 44 59 59 54 54 54 57 54 54 54 57 57 57 59 59 59 57 57 59 59 57 52 57 47 43 43 50 50 54 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 44 57 47 44 44 43 44 47 57 57 57 59 59 57 57 59 48 48 48 57 48 54 48 48 48 54 59 59 59 59 54 54 57 57 57 54 54 54 54 54 48 54 43 43 43 43 48 57 57 43 43 43 39 39 47 47 48 47 47 39 39 39 59 47 40 40 40 39 39 39 43 36 41 44 43 59 47 47 41 41 48 48 48 48 57 59 48 48 48 57 57 50 59 59 59 59 46 46 41 59 36 23 13 11 21 11 15 15 26 28 39 43 43 39 39 37 37 35 32 19 20 16 16 14 14 23 15 10 10 10 10 11 17 24 15 12 11 13 11 10 10 8 8 8 8 8 8 11 12 18 12 13 8 8 8 8 8 8 10 12 16 13 8 8 6 6 8 8 8 8 8 8 8 11 15 10 10 10 10 10 10 10 10 13 16 10 11 10 10 10 10 10 11 8 8 8 8 8 8 8 13 8 10 10 10 13 13 16 13 10 9 9 9 10 8 10 10 11 11 9 10 16 14 10 9 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 9 12 12 11 9 9 9 9 9 10 22 18 12 12 10 11 8 8 8 8 8 8 10 8 8 8 8 8 8 12 18 13 14 14 14 12 13 10 10 10 8 8 8 14 11 11 13 12 11 8 8 8 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 10 13 13 10 6 6 8 6 9 9 9 8 10 8 10 8 6 6	Open. Hide. 9 9 9 9 11 11 7 8 8 8 8 8 10 10 10 3 0 3 8 8 6 6 6 6 15 10 9 9 3 0 3 6 6 8 6 8 8 9 9 9 9 9 9 9 9 9 8 6 6 6 6 6 6 6 11 10 11 11 11 11 11 11 11 11 12 9 6 6 6 6 6 6 6 10 8 8 8 6 3 0 3 8 8 8 11 10 10 10 8 8 8 8 9 9 10 8 8 8 10 10 8 10 10 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 6 6 6 6 6 6 8 10 10 8 8 8 8 8 8 6 6 6 6 3 0 3 6 3 0 0 3 8 3 0 3 11 13 13 11 9 9 9 9 9 9 9 15 11 11 10 11 16 10 9 8 6 6 6 6 6 6 7 7 6 9 10 8 8 8 8 8 8 10 8 10 10 10 15 11 11 11 11 14 16 12 12 12 9 14 8 8 8 8 10 9 6 8 6 6 6 8 3 0 3 8 8 8 8 6 6 8 6 6 6 6 6 6 6 7 11 6 8 8 8 8 8 10 10 10 12 9 9 8 8 8 8 8 8 6 8 13 6 6 8 8 6 6 6 6 6 8 6 9 8 6 6 6 6 6 10 10 10 10 11 11 10 6 8 6 6 6 6 8 6 6 6 6 6 6 6 8 8 8 8 8 8 11 10 9 3 0 3 6 6 8 6 10 8 8 7 7 9 9 10 12 14 14 17 12 9 3 0 3 9 9 8 8 8 8 8 9 9 8 6 6 6 6 6 8 8 10 9 8 10 6 7 7 9 8 8 8 8 6 10 8 8 8 8 8 8 8 8 8 8 8 11 6 8 6 6 8 8 9 8 10 3 0 3 8 8 8 8 10 11 11 11 9 6 6 6 6 8 8 6 6 6 6 6 7 9 9 3 0 3 9 9 9 10 8 6 6 6 6 6 8 8 8 8 8 8 6 6 6 6 6 7 7 9 9 7 6 6 6 6 6 6 11 3 0 3 10 10 3 0 3 7 8 6 7 6 6 6 6 12 8 8 8 8 8 8 10 15 6 6 6 6 8 6 8 8 7 3 0 3 6 6 8 8 8 8 8 8 8 8 8 8 8 12 8 6 6 6 6 6 3 0 3 8 8 12 8 10 3 0 3 8 8 8 8 8 8 8 8 6 8 6 6 8 8 6 6 6 6 6 6 7 13 8 8 8 8 8 9 9 9 12 10 10 6 6 6 6 6 8 8 8 10 9 10 10 8 8 8 8 8 10 8 8 8 8 8 9 11 11 10 10 6 6 6 6 6 6 6 6 6 7 8 7 7 7 7 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 9 6 8 6 6 8 7 10 9 8 8 8 10 8 8 8 10 6 6 6 8 8 10 8 8 8 7 6 7 8 8 12 18 11 11 11 11 3 0 3 10 9 8 10 9 6 6 6 6 8 8 10 3 0 3 12 12 12 12 7 6 6 6 6 6 6 6 8 8 6 6 6 6 6 8 8 3 0 3 8 8 8 8 9 8 6 10 7 6 8 8 8 6 6 6 6 8 12 11 11 8 6 6 6 8 8 6 6 6 6 6 6 8 10 10 8 8 7 7 8 7 7 8 9 11 8 8 8 6 6 6 6 6 6 6 6 8 6 9 7 6 6 7 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 7 7 8 9 10 8 7 7 7 7 8 6 6 6 6 8 6 8 13 11 11 9 9 11 12 17 10 9 10 9 9 9 9 6 9 7 7 7 6 8 10 10 10 8 8 6 6 6 6 8 8 8 8 6 6 6 6 6 8 8 8 9 9 8 10 10 9 9 9 13 17 19 10 10 8 8 8 8 8 8 8 8 8 6 6 10 8 10 10 8 10 10 10 10 10 19 15 16 10 8 7 7 7 7 8 10 11 6 6 3 0 3 6 6 6 13 8 6 8 10 12 10 10 10 12 12 8 8 8 8 6 6 6 6 6 8 9 8 10 7 6 6 6 6 8 6 6 8 8 8 10 10 8 8 8 10 8 8 8 9 9 9 9 9 9 9 10 6 6 6 6 6 8 9 10 9 9 9 12 11 11 11 11 6 6 6 8 6 8 9 9 7 6 6 6 6 6 8 8 7 8 6 6 8 6 6 6 6 6 8 8 7 3 0 3 6 6 8 11 9 9 9 8 8 8 10 10 9 6 7 6 6 8 8 11 12 12 10 8 8 8 6 6 6 6 6 6 6 9 9 6 8 6 6 6 8 8 8 8 6 6 8 3 0 3 8 7 8 7 6 6 6 6 6 6 6 6 6 8 11 9 8 8 8 9 9 9 9 3 0 3 6 6 9 10 13 12 8 8 8 6 8 8 6 6 6 6 9 9 9 9 9 11 14 11 11 13 14 12 12 15 3 0 3 0 3 8 6 6 6 8 7 13 9 9 9 10 10 6 6 8 8 9 9 9 9 8 8 6 6 6 6 6 6 6 6 9 9 11 11 9 9 9 9 9 9 11 8 6 6 8 6 12 12 8 8 6 6 8 8 8 8 8 10 8 6 6 6 6 6 6 6 6 3 0 3 10 10 8 10 7 6 6 6 8 3 0 3 6 6 6 6 8 10 10 10 8 7 6 6 6 7 6 6 6 8 8 6 6 6 8 8 10 10 8 8 8 9 11 6 6 7 8 13 8 8 8 8 9 11 6 8 6 6 6 6 8 9 8 8 8 8 9 3 0 3 6 6 6 6 3 0 3 6 6 6 6 6 11 3 0 3 0 3 0 3 9 11 15 3 0 3 12 9 11 11 10 9 8 8 8 8 8 7 3 0 3 6 6 6 8 10 6 6 6 6 6 6 6 8 11 11 11 14 9 9 9 9 9 8 6 6 6 6 6 6 3 0 3 12 9 11 3 0 3 8 8 6 6 6 6 6 6 10 10 10 10 10 8 8 6 6 6 6 6 6 6 6 6 8 11 9 9 9 8 8 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 3 0 3 6 6 6 6 6 7 10 8 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8 8 7 7 7 10 10 10 9 10 9 7 6 6 6 6 6 6 6 8 8 8 8 8 8 8 10 9 9 9 10 10 9 6 10 6 6 6 6 3 0 3 6 6 8 8 9 9 10 9 10 3 0 3 6 6 6 10 10 8 8 8 8 8 8 8 8 13 11 15 13 9 10 8 8 8 6 6 6 7 8 8 8 9 6 6 7 6 6 6 8 6 6 6 6 7 6 6 6 10 6 6 6 7 8 6 6 6 6 8 11 6 6 8 3 0 3 6 6 3 0 3 10 9 11 11 12 6 6 6 6 6 6 6 6 8 6 8 8 8 10 12 12 9 9 9 6 6 6 7 8 8 10 10 6 6 6 6 8 8 10 11 7 9 9 7 11 8 12 12 11 10 10 10 11 10 8 8 3 0 3 3 0 3 8 8 8 8 8 3 0 3 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 7 7 9 7 6 8 8 8 8 8 8 12 9 9 9 9 9 10 9 8 8 8 8 7 8 6 6 6 6 6 6 6 6 3 0 3 9 10 6 8 6 6 7 6 6 6 6 6 8 8 8 8 8 6 8 6 6 8 3 0 3 8 7 7 8 7 7 7 3 0 3 6 6 6 10 8 6 6 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no393_k08.b1 MSMg01no393_k08.b1 CHROMAT_FILE:
MSMg01no393_k08.b1 PHD_FILE: MSMg01no393_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:40 2005
         (463 letters)



>mm_chr11_88548476_88549338
          Length = 863

 Score =  841 bits (435), Expect = 0.0
 Identities = 456/463 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttatatttctacaagcacagcagcaacacttaactttcagtagataatttccctttaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatatttctacaagcacagcagcaacacttaactttcagtagataatttccctttaatc 260

                                                                       
Query: 61  agggcctcagtcaagccctggccaactgaccccatcagacggcccctctaaagccttgtc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 agggcctcagtcaagccctggccaactgaccccatcagacggcccctctaaagcctcgtc 320

                                                                       
Query: 121 tgccaggccgcggagggacggggagagccgggaagagggcagcagagtctgacaagccaa 180
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccaggccgcagagggacggggagagccgggaagagggcagcagagtctgacaagccaa 380

                                                                       
Query: 181 ccttttactgaaaaaaataaatagttcattttgaataaaagtctaattcagcgtgttcag 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttttctgaaaaaaataaatagttcattttgaataaaagtctaattcagcgtgttcag 440

                                                                       
Query: 241 gaaagccacgtcctacgatggatggatctgtaggtgtcggggacagcttgtaagcttgga 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 441 gaaagccacgtcctacgatggatggttctgtaggtgtcggggacagcttgtgagcttgga 500

                                                                       
Query: 301 gccaagtgctagaggcaccaacacaggaccagaataatgtcactaatgtcactatagtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaagtgctagaggcaccaacacaggaccagaataatgtcactaatgtcactatagtaa 560

                                                                       
Query: 361 aagaaggtcctgccctgaaacgctgcagagatgggaacacgagcccaggacatggttgtt 420
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 aagaaggtcctgccctgaagcgctgcagagatgggaacacaagcccaggacatggttgtt 620

                                                      
Query: 421 tccaccctacctttcctctcccttaagcaacagagcaaggggg 463
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccaccctacctttcctctcccttaagcaacagagcaaggggg 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information