Query= MSMg01no394_a18.b1 MSMg01no394_a18.b1 CHROMAT_FILE:
MSMg01no394_a18.b1 PHD_FILE: MSMg01no394_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:17 2005
(409 letters)
>mm_chr11_8673886_8674694
Length = 809
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%)
Strand = Plus / Minus
Query: 1 acagacaatccctaaagtcagagagacagtcataggccacagaggggcacaagcatcccc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 acagacaatccctgaagtcagagagacagtcataggccacagaggggcacaagcatcccc 550
Query: 61 tactctaaaggtgctctaaggggtccctgacacctggaaaagtcccacttgggaaggaac 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 taccctaaaggtgctctaaggggtccctgacacctggaaaagtcccacttgggaaggaac 490
Query: 121 ccagccatgaccaagcagggcaagaccatatgtctgccctgaacctggggctcagctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccagccatgaccaagcagggcaagaccatatgtctgccctgaacctggggctcagctaca 430
Query: 181 aaggcacctccatgaatccctgcactgtggctgcccctgccaacagaccagtcacccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaggcacctccatgaatccctgcactgtggctgcccctgccaacagaccagtcacccaag 370
Query: 241 cactcggctcacaaagcaagcatgctcagagcaggaaatagacatctatgtttaaaatgt 300
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 369 cactcggctcacaaagcaagcatgctcagagccggaaatagccatctatgtttaaaatgt 310
Query: 301 tatgataatttccacatcacaagtttgtctagagcagagattaaagaaaggcaatgacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 309 catgataatttccacatcacaagtttgtctagagcagagattaaagaaaggcaatgaccc 250
Query: 361 tgccacatatcctggccatttaacatctatgacatgtgaagaaatgaga 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tgccacatatcctggccatttaacatctatgacatgtgaagaaatgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_a18.g1 MSMg01no394_a18.g1 CHROMAT_FILE:
MSMg01no394_a18.g1 PHD_FILE: MSMg01no394_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:17 2005
(456 letters)
>mm_chr11_8438713_8439568
Length = 856
Score = 781 bits (404), Expect = 0.0
Identities = 440/452 (97%)
Strand = Plus / Plus
Query: 1 tgaacataacattttcaaaatatatgcaaaaataagaaggacaaaggaaaacactctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacataacattttcaaaatatatgcaaaaataagaaggacaaaggaaaacactctaaa 260
Query: 61 ttaagtccagtgtgagtgaccactgacttcaccccatgtgtttgtctcaacacagggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagtccagtgtgagtgaccactgacttcaccccatgtgtttgtctcaacacagggctt 320
Query: 121 ggccagtgaggctgtcacagatggaggagggtccatctgagcccagaacgtgtcaaagag 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccagtgaggctgtcacagacggaggagggtccatctgagcccagaacgtgtcaaagag 380
Query: 181 aaagtgcataggtctttcaggttagaagacacagtttcatatctaatctttgactgctag 240
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 taagtgcataggtctttcaggttagaagacacagtttcatatctagtctttgactgctag 440
Query: 241 gcactgtcttttctatgatcccatcatttgagtaactgctggggaagcaacctagccagt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactgtcttttctgtgatcccatcatttgagtaactgctggggaagcaacctagccagt 500
Query: 301 gttaatgctcacgggtcacaggatgcttaattctcttgtaatgagttctggctttgtctt 360
||||||||||| ||||||||||||||||| | |||| ||||||||||||||||| |||||
Sbjct: 501 gttaatgctcatgggtcacaggatgcttagtgctctcgtaatgagttctggcttcgtctt 560
Query: 361 ctaaactcttcagagtgcctagaacaaaaacgtgttctctctctctctctctctctctct 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ctaaactcttcagagtgcctagaacaaaaatgtgttctctctctctctctctctctctct 620
Query: 421 ctctctctctctctctctctctttctctctct 452
|||| ||||||||||||||||| |||||||||
Sbjct: 621 ctctttctctctctctctctctctctctctct 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
