NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXX

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGGCTGTCATAATTTTCTA
ATAATGGTGATTTATCATCCCATTATAAGGTTCTACATCATTCCACTTAA
AGATATTCGACAGGAGATGCATCATACGTTCTAACTTAAAAATTCCTTAT
ATTGTAAACTATGGCTTTATGCTATTATTGTATATACTTTCTGGTCTGTT
TAATGGTATGGAAATATGAAAGGCAAATAGCTCAGTAAACATAAGAGCAC
ACAGACAACATAACTGAAAAACAGAAAACAAAAGGCAGGGGGCATTGAAC
AGATACAAAGAAACGAACCACATTAAAATATTCAGGAAAAGAGCAAAAAG
TGGGGAAAAAGATCACGGATGAAATTGCCGTCTGAGTTTTGATCCACAGC
AGTAAAACGCCTTTATGTTCCTGGGGGGGCAAGGTTCTTCAGCCCCCTTT
CTACTGCTGATCTAGTGAACCTAACAATGCTTTGGAGCTATTGATTGCTG
CAAGTGTGGCTTAATAGCAGAATCATTACTTTTTTAATCCTGAAACTGCC
AACTCCAACTCTTTTCAACGGAACTTCAACGTGTTCGATTGTGGGCTGCC
ATTTCTAATTGTTTTTAATTTTGTAGGACATCTCCAGCTCAGGGACTTTT
GTTCTGATTACTTTTTGCTGGTTTTTTGCTAAACCCTAGTTTTA

Query= MSMg01no395_a09.g1 MSMg01no395_a09.g1 CHROMAT_FILE:
MSMg01no395_a09.g1 PHD_FILE: MSMg01no395_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:06:43 2005
         (564 letters)



>mm_chr11_37493288_37494251
          Length = 964

 Score = 1067 bits (552), Expect = 0.0
 Identities = 561/564 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taaggctgtcataattttctaataatggtgatttatcatcccattataaggttctacatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 taaggctgtcataattttctaataatggtgatttatcatcccattataaggttctacatc 705

                                                                       
Query: 61  attccacttaaagatattcgacaggagatgcatcatacgttctaacttaaaaattcctta 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 704 attccacttaaagatattcgacaggagatgcatcatacgttctaatttaaaaattcctta 645

                                                                       
Query: 121 tattgtaaactatggctttatgctattattgtatatactttctggtctgtttaatggtat 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 644 tattgtaaactatggctttatgctattattgtatatactttccggtctgtttaatggtat 585

                                                                       
Query: 181 ggaaatatgaaaggcaaatagctcagtaaacataagagcacacagacaacataactgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggaaatatgaaaggcaaatagctcagtaaacataagagcacacagacaacataactgaaa 525

                                                                       
Query: 241 aacagaaaacaaaaggcagggggcattgaacagatacaaagaaacgaaccacattaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aacagaaaacaaaaggcagggggcattgaacagatacaaagaaacgaaccacattaaaat 465

                                                                       
Query: 301 attcaggaaaagagcaaaaagtggggaaaaagatcacggatgaaattgccgtctgagttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 attcaggaaaagagcaaaaagtggggaaaaagatcacggatgaaattgccgtctgagttt 405

                                                                       
Query: 361 tgatccacagcagtaaaacgcctttatgttcctgggggggcaaggttcttcagccccctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgatccacagcagtaaaacgcctttatgttcctgggggggcaaggttcttcagccccctt 345

                                                                       
Query: 421 tctactgctgatctagtgaacctaacaatgctttggagctattgattgctgcaagtgtgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctactgctgatctagtgaacctaacaatgctttggagctattgattgctgcaagtgtgg 285

                                                                       
Query: 481 cttaatagcagaatcattacttttttaatcctgaaactgccaactccaactcttttcaac 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 284 cttaatagcagaatcattacttttttaatcctgaaactgccaactccaactcttctcaac 225

                                   
Query: 541 ggaacttcaacgtgttcgattgtg 564
           ||||||||||||||||||||||||
Sbjct: 224 ggaacttcaacgtgttcgattgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)