Query= MSMg01no396_f20.b1 MSMg01no396_f20.b1 CHROMAT_FILE:
MSMg01no396_f20.b1 PHD_FILE: MSMg01no396_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:28 2005
(403 letters)
>mm_chr11_54995127_54995926
Length = 800
Score = 717 bits (371), Expect = 0.0
Identities = 394/403 (97%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 1 gtctgccttttcccctattctgggagtgcagtcctgtctctgccacagttcaggaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtctgccttttcccctattctgggagtgcagtcctgtctctgccacagttcaggaagtca 541
Query: 61 aactggtctctgggcctcagtttcctttgtgatgatgtggggctgcccctttcctccctt 120
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aactggtctccgggcctcagtttcctttgtgatgatgtggggctgcccctttcctccctg 481
Query: 121 tcctgggactgcctcccagggtcctgcagaagggcggagctacaaagcagcttggcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcctgggactgcctcccagggtcctgcagaagggcggagctacaaagcagcttggcttcc 421
Query: 181 agccacaactccactgtgcactcatagacaaattatctaagtattctggggcctccattt 240
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 420 agccacgactccactgtgcactcatagacaaattatctaagtattttggggcctccattt 361
Query: 241 cccatctacataccaaaccccaaccattgcctactttattgtcctgccaagacgattaaa 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cccatctacagaccaaaccccaaccattgcctactttattgtcctgccaagacgattaaa 301
Query: 301 tgagatgttatatttaaagactccgcgcatacagggtctcatacaattagtgtttcatgg 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 300 tgagatgttatatttaaagactccacgcatacagggtctcatacaattagtgtttcatgg 241
Query: 361 tacagacagggcccaagccgctaatgctggaacaattctggat 403
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 240 tacagacagggcccaagccgctaa---tggaacaattctggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 800
Length adjustment: 9
Effective length of query: 394
Effective length of database: 791
Effective search space: 311654
Effective search space used: 311654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_f20.g1 MSMg01no396_f20.g1 CHROMAT_FILE:
MSMg01no396_f20.g1 PHD_FILE: MSMg01no396_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:28 2005
(265 letters)
>mm_chr11_54780556_54781220
Length = 665
Score = 482 bits (249), Expect = e-140
Identities = 261/265 (98%)
Strand = Plus / Plus
Query: 1 attatggtccatttctagtatgaggtgcattgaaagcttattagtgaatcacaaattgct 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 attatggtccatttctagtatgaggtgtattgaaagcttattagtgaatcacaaattgct 260
Query: 61 aacagtccttggcccctgtcttccctaactgggtagacactctcggttcatcctaggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagtccttggcccctgtcttccctaactgggtagacactctcggttcatcctaggttg 320
Query: 121 gaaaagttacaagcaggggcctctgctacaggaccctggccacatatcagaaagggaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gaaaagttacaagcaggggcctctgctacaggaccctggccacatatcagaaaaggaggg 380
Query: 181 actctggaaatccagggtatacatgagataacgttttatgtcctgaacatgtaggatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctggaaatccagggtatacatgagataacgttttatgtcctgaacatgtaggatagg 440
Query: 241 ggatttatagagggggtgacactag 265
||||||| || ||||||||||||||
Sbjct: 441 ggatttagagggggggtgacactag 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
