Query= MSMg01no398_g23.b1 MSMg01no398_g23.b1 CHROMAT_FILE:
MSMg01no398_g23.b1 PHD_FILE: MSMg01no398_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:09 2005
(411 letters)
>mm_chr11_32164827_32165637
Length = 811
Score = 470 bits (243), Expect = e-137
Identities = 289/325 (88%), Gaps = 32/325 (9%)
Strand = Plus / Minus
Query: 119 tgtctttaatctcagcgctctagatacagaggcaggcacatatttctgagtcccaggcca 178
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 811 tgtctttaatctcagcgctctagatacagaagcaggcacatatttctgagtcccaggcca 752
Query: 179 gcctggtttacatagtgacttccagattagtcagagccacgtggtaagatcctgtctgaa 238
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 751 gcttggtttacatagtgacttccagattagtcagagccacatggtaagatcctgtctgaa 692
Query: 239 aaaaaataatgaaaaacatacaaaacaaaacaaaatccttttctttcc------------ 286
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaaaaataatgaaaaacatacaaaacaaaacaaaatccttttctttcctttttttttttt 632
Query: 287 --------------------ttttttttttggtcacaataggtagccattttgctatttc 326
||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttttttttttttttttttttttttttttttggtcacaataggtagccattttgctatttc 572
Query: 327 tgtgtagtttttgccagaattttgatttttatggtgtcatggtttcagtgtagtctcttg 386
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tgtgtagttattgccagaattttgatttttatggtgtcatggtttcagtgtagtctcttg 512
Query: 387 tggtttctgagtttccttatctgca 411
|||||||||||||||||||||||||
Sbjct: 511 tggtttctgagtttccttatctgca 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_g23.g1 MSMg01no398_g23.g1 CHROMAT_FILE:
MSMg01no398_g23.g1 PHD_FILE: MSMg01no398_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:10 2005
(388 letters)
>mm_chr11_31968395_31969182
Length = 788
Score = 750 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1 tcatcaaactctgcacatttcctgaagccttcatggtattccccccaaatatgctttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcaaactctgcacatttcctgaagccttcatggtattccccccaaatatgctttatt 260
Query: 61 tctgtatcaattacgttggataatggtatcatcagccattgggctttgcagtgtgaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgtatcaattacgttggataatggtatcatcagccattgggctttgcagtgtgaatat 320
Query: 121 tgttgttgtggctgttgttatttttaattattgttgatttgaagctctagggactgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgttgtggctgttgttatttttaattattgttgatttgaagctctagggactgaccc 380
Query: 181 caggaccttgtacatccaggacaagagctcttccagtgagccgaatccccaccctaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggaccttgtacatccaggacaagagctcttccagtgagccgaatccccaccctaagtg 440
Query: 241 gcacgattacagcgtttcgcagatgttcacaaatgtaggtcaagcaggcagagtactagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacgattacagcgtttcgcagatgttcacaaatgtaggtcaagcaggcagagtactagg 500
Query: 301 ttcgacttgccctgctattccagtaactgccatgtgcccacaccctggctggagctcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcgacttgccctgctattccagtaactgccatgtgcccacaccctggctggagctcaca 560
Query: 361 cacctgctcaccggcacctcctgcatct 388
||||||||||||||||||||||||||||
Sbjct: 561 cacctgctcaccggcacctcctgcatct 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|