Query= MSMg01no399_b14.b1 MSMg01no399_b14.b1 CHROMAT_FILE:
MSMg01no399_b14.b1 PHD_FILE: MSMg01no399_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:01 2005
(492 letters)
>mm_chr11_55134626_55135517
Length = 892
Score = 853 bits (441), Expect = 0.0
Identities = 477/493 (96%), Gaps = 8/493 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaaggtgtgctccaccacagccagatttttaatgcgggttctcgagattaaatt 63
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 618 ggaattcaaggtgtgctccaccacagccagatttttaatgcgagttctcgagattgaatt 559
Query: 64 caagtcctcatgattagatagcaagcactttactgcctgagccatctcctcaggctctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caagtcctcatgattagatagcaagcactttactgcctgagccatctcctcaggctctgc 499
Query: 124 acagagctaagacactggtccaccaccatggacactcttctctatgtaactgtccctcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acagagctaagacactggtccaccaccatggacactcttctctatgtaactgtccctcag 439
Query: 184 atcctacagtgccatcttcctctctgcaagtctctttggactcagggcttttggccacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atcctacagtgccatcttcctctctgcaagtctctttggactcagggcttttggccacct 379
Query: 244 ctctgctcacacagacatcctcactccttcttctctccattgccccacacacccctttgc 303
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 378 ctctgctcacacagacatcctcactccttcttccctccattgccccacccacccctttgc 319
Query: 304 tcctgcctcagggcttttcattgcctgtatctttggccagaaactctcttccttaagata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcctgcctcagggcttttcattgcctgtatctttggccagaaactctcttccttaagata 259
Query: 364 actaccccc----ctatcttcctcactctgacagcatcctgctcttatatcacctgtcct 419
|||| | |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 258 acta----catggctatcttcctcactctgacagcatcctgctcttagatcacctgtcct 203
Query: 420 tccaaagtccctgcctaggacaacccttcttccccatcctacaaggtttttctgtatctc 479
|||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 202 tccaaagtcccttcctaggacaacccttcttccccatcctacatggttttcctgtatctc 143
Query: 480 agcttcatggaag 492
|||||||||||||
Sbjct: 142 agcttcatggaag 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_b14.g1 MSMg01no399_b14.g1 CHROMAT_FILE:
MSMg01no399_b14.g1 PHD_FILE: MSMg01no399_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:01 2005
(346 letters)
>mm_chr11_54941431_54942176
Length = 746
Score = 648 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Plus
Query: 1 cacattcgtgatctcatctggttattggcagagctcagcgaggagggtggggctggtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacattcgtgatctcatctggttattggcagagctcagcgaggagggtggggctggtgac 260
Query: 61 attgtcctctttctattgctctggctttgggaaacctggatgccaccatcaccccaccca 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 attgtcctctttctattgctctggctttgggaaacctgaatgccaccatcaccccaccca 320
Query: 121 cttgaaaaagcccaaggctgtgatgacccataaccatgataacagttgataatccacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgaaaaagcccaaggctgtgatgacccataaccatgataacagttgataatccacaga 380
Query: 181 gcttgctgtgtgcccagcagttttctaagtattttctgtatattaaagcaagcaattgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttgctgtgtgcccagcagttttctaagtattttctgtatattaaagcaagcaattgct 440
Query: 241 gccagagagtgcagtcattattcatgttgtccatcaaaggtttctaggcctttccttgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccagagagtgcagtcattattcatgttgtccatcaaaggtttctaggcctttccttgcc 500
Query: 301 tggggtgggaagtgagagccttttcagctgaagtttgac 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggggtgggaagtgagagccttttcagctgaagtttgac 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
