Query= MSMg01no401_g16.b1 MSMg01no401_g16.b1 CHROMAT_FILE:
MSMg01no401_g16.b1 PHD_FILE: MSMg01no401_g16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:02 2005
(249 letters)
>mm_chr11_67845678_67846325
Length = 648
Score = 443 bits (229), Expect = e-129
Identities = 240/245 (97%), Gaps = 4/245 (1%)
Strand = Plus / Plus
Query: 1 tcttgctaagaactagggggtaaagatgaaaaatatacttttattattattattattatt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 tcttgctaagaactagggggtaaagatgagaaatatacttttattattattattatta-- 261
Query: 61 acagcacagctaggagccagtgtctgtgagtctgctgagtatgcagaaatgattgcttgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 -cagcacagctaggagccagtgtctgtgagtctgctgagtatgcagaaatgattgcttgg 320
Query: 121 catgggtgtggtacttgtcacatggctttgctgctgctagcttttagttttgatgatgag 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 catgggtgtggtacttgtcacatggctttgctgctgctagcttt-agttttgatgatgag 379
Query: 181 ctgagaccattgagccacaaggactttgccttttctagactatgccttcttcatttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgagaccattgagccacaaggactttgccttttctagactatgccttcttcatttcttt 439
Query: 241 ctggg 245
|||||
Sbjct: 440 ctggg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_g16.g1 MSMg01no401_g16.g1 CHROMAT_FILE:
MSMg01no401_g16.g1 PHD_FILE: MSMg01no401_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:02 2005
(210 letters)
>mm_chr11_68015201_68015810
Length = 610
Score = 406 bits (210), Expect = e-118
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 1 catggatttcagtttatacgctctacggggagaggtcttgagcctcagctgatgtggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 catggatttcagtttatacgctctacggggagaggtcttgagcctcagctgatgtggaac 351
Query: 61 attgcaacaccagcctgaagctgccttgctcctgacttggcccgttacccacaaagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 attgcaacaccagcctgaagctgccttgctcctgacttggcccgttacccacaaagctgg 291
Query: 121 cagagctggcttttggattgtgaatttgatcaggttgcctctttgctcagaggtctgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagagctggcttttggattgtgaatttgatcaggttgcctctttgctcagaggtctgcag 231
Query: 181 tgactccaactgaggtccagactctcctgt 210
||||||||||||||||||||||||||||||
Sbjct: 230 tgactccaactgaggtccagactctcctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
