Query= MSMg01no406_l14.b1 MSMg01no406_l14.b1 CHROMAT_FILE:
MSMg01no406_l14.b1 PHD_FILE: MSMg01no406_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:08 2005
(421 letters)
>mm_chr11_8564372_8565193
Length = 822
Score = 741 bits (383), Expect = 0.0
Identities = 404/411 (98%), Gaps = 1/411 (0%)
Strand = Plus / Minus
Query: 12 ctgcttgatacacgtagagccccacgggataataagtcactggagggtattgtaggactt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctgcttgatacacgtagagccccacgggataataagtcactggagggtattgtaggactt 563
Query: 72 cctcctggcagaaacagcacttagacacactggatgaaagaataaactggttttgcagga 131
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 562 cctcctggcagaaacagcacttagacacactggatgaaacaataaactggttttgcagga 503
Query: 132 atgggactcgaacctccctctccaggtgcacttacgtagacatggaactgttgagcctat 191
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgggactcgaacctccctccccaggtgcacttacgtagacatggaactgttgagcctat 443
Query: 192 agaatactgggg-ccccgaggtatttagggaggccagcgaagtgggagggtattttattt 250
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agaatactggggcccccgaggtatttagggaggccagcgaagtgggagggtattttaaag 383
Query: 251 agctcatcccttgggtcaggaacccgagggggtgagtgcggggggcgggtgtccagcacc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agctcatcccttgggtcaggaacccgagggggtgagtgcggggggcgggtgtccagcacc 323
Query: 311 tggaaacgcaggacattgttaggaagatgagaccaggtgaccggcagggctccggtgcgc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggaaacgcaggacattgttaggaagatgagaccaggtgaccggcagggctccggtgcgc 263
Query: 371 gggcggtccgtagcgattgcccgagccgcctcgagggggccctgccgcggg 421
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 262 gggcggtccgtagcgattgccggagccgcctcgagggggccctgccgcggg 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_l14.g1 MSMg01no406_l14.g1 CHROMAT_FILE:
MSMg01no406_l14.g1 PHD_FILE: MSMg01no406_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:08 2005
(467 letters)
>mm_chr11_8380004_8380870
Length = 867
Score = 818 bits (423), Expect = 0.0
Identities = 456/467 (97%)
Strand = Plus / Plus
Query: 1 ttgggcaatagggggaacctgcagcagcctacaaaggtgataatgtttcaagtcacaatg 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgggcaataggggttacctgcagcagcctacaaaggtgataatgtttcaagtcacaatg 260
Query: 61 cagtctttcataacaaaggaggatttgttagcagtctaggcttaagctaaaaacacaaaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cagtctttcataacaaaggaggatttgttggcagtctaggcttaagctaaaaacacaaaa 320
Query: 121 tccctacaaatatggaggggcgagcatgtgactccatgaagcagggccaccgtgggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctacaaatatggaggggcgagcatgtgactccatgaagcagggccaccgtgggttca 380
Query: 181 aagtcagtctggactaggtgctgagaggctatctcaagaacagtaactaaatgggggctg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 aagtcagtctggactaggtgctgagaagctatctcaagaacagtaactaaatgggggctg 440
Query: 241 aggagatggccccatctgtaaagtgtctgctacacagggaggagacttcacacaaggtca 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 aggagatggccccatctgtaaagtgtctgctgcacagggaggagacttcacacaaggtca 500
Query: 301 ccaaaattcactctcagggagacaggcggccatcctaactcttaagatgggtggtcctgg 360
||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 501 ccaaaattcactctcagagagacaggcggccatcctaactctcaagatgtgtggtcctgg 560
Query: 361 gatggaggttggacacagcaggactaacaaggcctagtgagagaaagtcttaggggacag 420
|||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 gatggaagtcggacacagcaggactaacaaggcttagtgagagaaagtcttaggggacag 620
Query: 421 cagcagccttagatccaaggtgcctgcatccgccccagcaatggtga 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcagccttagatccaaggtgcctgcatccgccccagcaatggtga 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
