Query= MSMg01no407_e06.b1 MSMg01no407_e06.b1 CHROMAT_FILE:
MSMg01no407_e06.b1 PHD_FILE: MSMg01no407_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:51 2005
(619 letters)
>mm_chr11_113265173_113266191
Length = 1019
Score = 797 bits (412), Expect = 0.0
Identities = 427/432 (98%)
Strand = Plus / Minus
Query: 188 agatttcttcttaggtagttgactttttaaaatgtatctatgttttgaggttgttgtgtt 247
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1019 agatttcttcttaggtagttgactttttaaactgtatctatgttttgaggttgttgtgtt 960
Query: 248 ctccttatttttttccctcagaatggtcagcattggtctagagaaagctaccagtcttgt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 ctccttatttttttccctcagaatggtcagcattggtctagagaaagctaccagtcttgt 900
Query: 308 gtgttggctttgtaccgtgagccttcgcttgtaacatgattatcagcgttaagagttttc 367
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 899 gtgttggctttgtaccgtgagccttcgcttgtaacgtgattatcagcgttaagagttttc 840
Query: 368 tggagaagaccgtagggtcatgttgtctgcacgcaatgataatgcaaagcggggactctg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tggagaagaccgtagggtcatgttgtctgcacgcaatgataatgcaaagcggggactctg 780
Query: 428 ggtaaataggatgggagatgtcttaaccataagatcactgtgctctgacaagagacgaga 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggtaaataggatgggagatgtcttaaccataagatcactgtgctctgacaagagacgaga 720
Query: 488 gaacgcacttagagcgtgacattagcaagcttaatttgtcttccaaaagacatttaagga 547
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 719 gaacgcacttagagcgtgacattagcaggcttaatttgtcttccaaaagacatttaagga 660
Query: 548 gcctcggtacaaaccacttaggatgctaagaacaccgaggtcaaattgattattaaagat 607
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gcagcggtacaaaccacttaggatgctaagaacaccgaggtcaaattgattattaaagat 600
Query: 608 ggctggaagcga 619
||||||||||||
Sbjct: 599 ggctggaagcga 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_e06.g1 MSMg01no407_e06.g1 CHROMAT_FILE:
MSMg01no407_e06.g1 PHD_FILE: MSMg01no407_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:51 2005
(433 letters)
>mm_chr11_113093060_113093893
Length = 834
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 1 cacactccacccctgatcagccctcgctttatagtccagaactgcagaccaggaaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacactccacccctgatcagccctcgctttatagtccagaactgcagaccaggaaaagaa 260
Query: 61 aaggcaggactgggttgcaggaagagagggaccatgggcctcagcatccac-acacgaag 119
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 261 aaggcaggactgggttgcaggaagagagggaccatgggccgcagcatccatgacacgaag 320
Query: 120 ctggccctggggaatgcaactaagatctttatcatccaacatcattctggcacactcagt 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ctggccctggggaatgcaactaagatctttatcatccaacatcgttctggcacactcagt 380
Query: 180 gtgatacacctgtctccagtcaggcaaatgagtaggttcacaggcagaggcctgccctgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgatacacctgtctccagtcaggcaaatgagtaggttcacaggcagaggcctgccctgc 440
Query: 240 caaacaatgcttctctttgtctcctctcagggctcaggagcctcaaggaagccaaatcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaacaatgcttctctttgtctcctctcagggctcaggagcctcaaggaagccaaatcca 500
Query: 300 tcagcacctgtcagggccctggatgtacacaatgcaagctgtgatccccactccccagcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagcacctgtcagggccctggatgtacacaatgcaagctgtgatccccactccccagcc 560
Query: 360 aagccccgggcagcactgactgacacgcaacttgtcagtcaccttctcagagctaagggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagccccgggcagcactgactgacacgcaacttgtcagtcaccttctcagagctaagggt 620
Query: 420 ggggacccgtgaag 433
||||||||||||||
Sbjct: 621 ggggacccgtgaag 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
