Query= MSMg01no407_k17.b1 MSMg01no407_k17.b1 CHROMAT_FILE:
MSMg01no407_k17.b1 PHD_FILE: MSMg01no407_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:22 2005
(643 letters)
>mm_chr11_99827237_99828274
Length = 1038
Score = 1112 bits (575), Expect = 0.0
Identities = 620/637 (97%), Gaps = 5/637 (0%)
Strand = Plus / Plus
Query: 7 ggaattccttgactctctaagccttctgtcctgacctgtcattactagattggttcactg 66
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 207 ggaattccttgactctctaagcattctgtcctggcctgtcattactagattggttcactg 266
Query: 67 ccaaccagattgccctctcaagtccatagcattctttaaggagaacggatgtatggctat 126
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 267 ccaaccagattgccctctcaagtccatagcattctttaaggagaacagatgtatggctat 326
Query: 127 gaactacagtgatcccttttaaaaaatgctaccttcaaagaacatttggggcagaagtca 186
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 aaactacagtgatccctttttaaaaatgctaccttcaaagaacatttggggcagaactca 386
Query: 187 tggttctgataaacttggaaggatctggcctttagccttgcaaactcacagactcatttc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggttctgataaacttggaaggatctggcctttagccttgcaaactcacagactcatttc 446
Query: 247 tgtttacattctaaaggtgaagccactgcttggagccgacacattctgaggaagcctata 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtttacattctaaaggtgaagccactgcttggagccgacacattctgaggaagcctata 506
Query: 307 aaccagggcatctgtttattaacttgtggtagcattagcttacagaaacttctcacccac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 507 aaccagggcatctgtttattaacttgtggtagcattagcttacagaaacttctcacctac 566
Query: 367 cacatgaccaaggaatcaacacaggaagtgaaaagaacaaaatgttgaggggggaggggc 426
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 567 cacatgaccaaggaatcaacacaggaagtgaaaagaacaaaatgttgagggggg----gc 622
Query: 427 atttgatatgctcattgtgacaatgtctcaccaaggaaacaggggaattcacagtccgaa 486
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 623 atttgatatgctcattgt-acaatgtctccccaaggaaacaggggaattcacagtccaaa 681
Query: 487 gaccaaagcccaccagcacgccaccgtgggccattcattggctgggcactggcagacttg 546
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaccaaaccccatcagcacgccaccgtgggccattcattggctgggcactggcagacttg 741
Query: 547 tctgaactcttgagtgtccatgcttcgtcaataagtttcacatttttatattcttagtca 606
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctgaacacttgagtgtccatgcttcgtcaataagtttcacatttttatattcttagtca 801
Query: 607 agtctctgtcaattcttcagattttcaagctgtcttt 643
|||||||||||||||||||||||||||||||||||||
Sbjct: 802 agtctctgtcaattcttcagattttcaagctgtcttt 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1038
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1028
Effective search space: 650724
Effective search space used: 650724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_k17.g1 MSMg01no407_k17.g1 CHROMAT_FILE:
MSMg01no407_k17.g1 PHD_FILE: MSMg01no407_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:22 2005
(500 letters)
>mm_chr11_99952013_99952912
Length = 900
Score = 600 bits (310), Expect = e-175
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 1 ccctacttcagctccctaaaagggcagctgccagcaatctggctctaggtagcctgtacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccctacttcagctccctaaaagggcagctgccagcaatctggctctaggtagcctgtacc 255
Query: 61 actgtcttcttggagcacaatggctgaatttgctgaggctcaggcacctgcctcattcac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 actgtctgcttggagcacaatggctgaatttgctgaggctcaggcacctgcctcattcac 195
Query: 121 tttgttcaacatacccttactgagcaccaatatgtgctaggcaggatgccagatatcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttgttcaacatacccttactgagcaccaatatgtgctaggcaggatgccagatatcatg 135
Query: 181 ggcaagggttggtttatgggaggaaggtcttggtagagcacaggaaggatacctacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ggcaagggttggtttatgggaggaaggtcttggtagagcacaggaaggatacctacttct 75
Query: 241 acttactgcatctatgcatctatgcatctatgtatctatctatgtatctatccatctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 acttactgcatctatgcatctatgcatctatgtatctatctatgtatctatccatctatc 15
Query: 301 tatgtatctatgta 314
||||||||||||||
Sbjct: 14 tatgtatctatgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
