NNCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGAACCCCCTTATGTGCATACTGGGCTCTGAGTGTTTCAGGT
CAGGACTCCACTGGCTTTGAACCTGGGTGTCTTACAGCAGCATGGCTCTA
TACCAGGTCTGGAGGAAAGCCTTCCATTGGTCACTTTCATATTTTATTTA
TTGACATTTCAAATGCTATTCCCTTTCCCTGTGTTCCCCCACCCACCCAC
GCACTACCCAGTCTCCCTGCCCTGGCATTCCCTACACTGGGGCATTGAGC
CTTCACAGAACCAAGGGCCTCTCCTCCCATTGATGCTCACCAAGGTCATC
CTTTGCTACATATGCAACTGGGGACGTGGGTACCTCCATATATACTCTTT
GGTTGGTGGTTTAGTTCCTGGGAGCTCTGGGGGAGGTCTGGTTGGTTTAT
ATTGTTGTTCTTCCTATGGGGTTGCTCTTTCAGTCCTTTCTCTAACTTCT
CCATTGGGAACCCTGTGTTCAGACCAATGGTTGGGTGCAAGCATCCCGCT
CCTGATTTGTCCGGCTCTAGAAAAACCTCTTCAGAAAAAGCTATATTGGG
GTCCCGGCCAGCAGCATTTATTGGCCCCCCCAAAAAAGGTGGTGCTGGTG
GCTCCGCTTATTTGAAGCATTCCCTTATGGTAATTTCACTGTAAGGGCTT
TCTTTTTTTTTTGCTCCTATTTTTATTCTTATTCCTTCCCGCGGCATATT
TCTTCCCCCTCCCCCCTTCTTTCTTTTGCTAGAGTGAAGA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAAACTGCAGCCAGGGATCAGAAG
AATTCAAATGAGTTTCTGGGGAGATGGCTCAATCAATCTGCATTGTGCTG
AGTTTGGATCCCTAGCACCTAGGCTGCATGTGATGGTTGGTGTGCCTCTA
ATCCCAGTGAGGGAGGCAGGTGCAGGAGGACCCGGGGGCTTACAAGCTAG
CCAGTCTAACTCAACTGATGACTTTGTATCCAATATAAGATGAATTGACC
CTTGGGGGATGGCACACAAGGTTGACCTCTGACCTCTGTGGGCACGTACA
TATATGGGCATGCGTGCATGAATGAACGGACATACACACACTTTTCTGAG
TTTTTCTCGGGTCAGTTCCACCAGGGTGGAGGTGAGCTAGAGTGTGAGAC
TCGGTTACAGCGTTTGTAGGAATCAAACAGGATATTTGCACGCAATAGGA
AAACAGCTAAAAATATTGATCCCTAACTTTTATGTGTTAAAACGAACTAC
AAACGTATTTTCTAATTTCTCCACATGGATTTCCCTTAATCTTCCACCTT
CGGCCTTCGGTTGTGTGAAATTTGTTATTTGTCTCCCACATATTTTTTTC
CTGTATTCTGGCTATTTTTTCATTCTACTTTTTCCTCTATTCCTCCTTTT
TTCTCCTTTTTCACTTTCTTTTCCATACTCTTTTTCTTCCTTTTTTAATC
TCCACTTTTACTTTTCTTTTCAATTCTTTCTTCTTACTAT

Query= MSMg01no409_f20.b1 MSMg01no409_f20.b1 CHROMAT_FILE:
MSMg01no409_f20.b1 PHD_FILE: MSMg01no409_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:42 2005
         (455 letters)



>mm_chr11_112508791_112509645
          Length = 855

 Score =  810 bits (419), Expect = 0.0
 Identities = 437/443 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaacccccttatgtgcatactgggctctgagtgtttcaggtcaggactccact 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaacccccttatgtgcatactgggctctgagtgtttcaggtcaggactccact 264

                                                                       
Query: 65  ggctttgaacctgggtgtcttacagcagcatggctctataccaggtctggaggaaagcct 124
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gactttgaacctgggtgtcttacagcagcatggctctataccaggtctggaggaaagcct 324

                                                                       
Query: 125 tccattggtcactttcatattttatttattgacatttcaaatgctattccctttccctgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccattggtcactttcatattttatttattgacatttcaaatgctattccctttccctgt 384

                                                                       
Query: 185 gttcccccacccacccacgcactacccagtctccctgccctggcattccctacactgggg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gttcccccacccacccacgcactacccagtctccctgccctggcattccctacactgggg 444

                                                                       
Query: 245 cattgagccttcacagaaccaagggcctctcctcccattgatgctcaccaaggtcatcct 304
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcgagccttcacagaaccaagggcctctcctcccattgatgctcaccaaggtcatcct 504

                                                                       
Query: 305 ttgctacatatgcaactggggacgtgggtacctccatatatactctttggttggtggttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgctacatatgcaactggggacgtgggtacctccatatatactctttggttggtggttt 564

                                                                       
Query: 365 agttcctgggagctctgggggaggtctggttggtttatattgttgttcttcctatggggt 424
           |||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 agttcctgagagctctaggggaggtctggttggttgatattgttgttcttcctatggggt 624

                                  
Query: 425 tgctctttcagtcctttctctaa 447
           |||||||| ||||||||||||||
Sbjct: 625 tgctctttaagtcctttctctaa 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space:   376025
Effective search space used:   376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)