Query= MSMg01no410_g12.b1 MSMg01no410_g12.b1 CHROMAT_FILE:
MSMg01no410_g12.b1 PHD_FILE: MSMg01no410_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:08 2005
(227 letters)
>mm_chr11_82300198_82300824
Length = 627
Score = 395 bits (204), Expect = e-114
Identities = 221/232 (95%), Gaps = 10/232 (4%)
Strand = Plus / Minus
Query: 1 agggaccaaggcgagaagggtggccttccctcttcacctcagccaggcacccaggggatg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 397 agggaccaaggcgagaagggtggccttccctcttcacctcagtcaggcacccaggggatg 338
Query: 61 gctccacccacttcttgctttcttgccaacagtggagtatgtttgtgatttgtcctttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctccacccacttcttgctttcttgccaacagtggagtatgtttgtgatttgtcctttca 278
Query: 121 atgtatccatgtgtatcactcataaatgcctgtctctgcaagtcaag-----atttttct 175
||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 277 atgtatccatgtgtatcactcataaatgcctgtctctgcaagtcaagaaagca-----ct 223
Query: 176 cttgccaactgtggattcatgctgtgtgtgtatgtgtgtgtgtgtgtgtgtg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cttgccaactgtggattcatgctgtgtgtgtatgtgtgtgtgtgtgtgtgtg 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_g12.g1 MSMg01no410_g12.g1 CHROMAT_FILE:
MSMg01no410_g12.g1 PHD_FILE: MSMg01no410_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:08 2005
(244 letters)
>mm_chr11_82132588_82133231
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Plus
Query: 1 tcacggtcataaccgtgaccttgggcttctctccaagctggaccctgagatgccctccct 60
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tcacggtcataactgtgaccttgggcttctctccaagctgaaccctgagatgccctccct 260
Query: 61 cctagaagtttggtttcaccactgttgtcttgtctctgtttcctccagggtggtaagcca 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cctagaagtttggtttcaccactgttgtcctgtctctgtttcctccagggtggtaagcca 320
Query: 121 ctagacagacacatgtatcttccatccctcaagtgttctgccttgcttaactttctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagacagacacatgtatcttccatccctcaagtgttctgccttgcttaactttctctct 380
Query: 181 caaatgctatcagggaccaggaccacatgttccacagtgcctatggcctacactaacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatgctatcagggaccaggaccacatgttccacagtgcctatggcctacactaacaag 440
Query: 241 atct 244
||||
Sbjct: 441 atct 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
