NGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTACTATCCTTTCAATGCAGAATTAATATCAATATTCCTCA
AATTATTACACCACATATGAAAAGAAAAAATATTGTATAACTTGTTATGT
AAAGCCATTATTATCCTAACTAAACCACAAAAGACCAAACTAAGAAAGAG
CATTACAGAACAGTTTCTCTTATGAATATACATGCAGAAATTTCCAATGA
AATAGTTGTAAACCAGACCTAACAACATACCAAAACTATCATCTATCAGG
ATTAAATAGATTTCATTTCTTATACACAGGGATAGCTCAACATACATAAA
TCTACTAATTAAATCAGACTGAAAGACAAAAATCATCTGATCATCTCATT
AAATACAGAAAATTTCTATGACATAATCTAACAGTCTTTATAATAAAAGT
TCTGAAGAGATTAGGAATACAAAGTATACACATCAACATACTAATAACAG
TTTGTAGGAAGTCCATAGCTAACAGAAACTCAAAAGTAGAGAAACTCAAA
GGAAGTCCACTAAAATCAAGAACAAGACAAAGTTGTTCTCTTTACCTTTT
TAATATAGTACTTGATGTATTAGCTAATAGAATAAATTAACCAAGAAGAT
ATAGTGAATGCATATTTTATTGCAGATGACATGATAGAATGTATATGTGA
CCTAAAGGATCCACACGGAAAGTTTTATAACTAATACTCCCTTTTCAC

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTCATTAGCTCTCTCACAGGTCCC
TGGGCCAGGCCCAGCACATCACTAGGTGATAAGTGGGGTTGGGAAGGGAG
AAATATACTTCTAGCTTACAGACTGCTGAGTTTCTTATTTTATGGGAACT
ACAGATGTAACCTAGGAGCAAGGGGCAAACAAAGCAAGTCACCAGGGCCT
TAAGCTTTATTTCTAGTTTAAAAGAGCAGTTTATCTCTCAATTCATGTGT
AAGTATGAATGCTTAGTGTTTCTTCGGCTATAATCTGCTGAGTTATGGAT
ATTTAAGAATACAGAGCTTTGCATAGTGATTGTATAGACATCATTGCCTT
TTGTGAATTTGGAAGAAATATCACATCATTGCTAAGCAATTATGCATAAA
CTGTACATTAATTGGAAACTTTTCCAATTCAAACATAAATAATTATGATA
TCTCTGTGCTAATTAATCCCTACACAAGAGGTGATCTTACCCAATTGCAT
TTTAGGAAGACATGTTTTCCTTTTCTCTGCCCCATACTTAATAAACCGCT
TTTTATTTTTGTTCCTCCTCCCACGGCACTTGCCCCAAATGATAATGGTT
TTTTTCTCTTTTTTTCGGGAGCCTGCTGCGAAATACTTCCTCCGTTCCCT
TTCCCTTTAAACCTCTTTTGTTTCGCCTCCCCTCTCCCCTATTTTTCCCC
TCTCCTCCTCTCTTTCCTCTTTCCCC

Query= MSMg01no411_n11.g1 MSMg01no411_n11.g1 CHROMAT_FILE:
MSMg01no411_n11.g1 PHD_FILE: MSMg01no411_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:01 2005
         (464 letters)



>mm_chr11_14461358_14462221
          Length = 864

 Score =  874 bits (452), Expect = 0.0
 Identities = 461/464 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcattagctctctcacaggtccctgggccaggcccagcacatcactaggtgataagtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcattagctctctcacaggtccctgggccaggcccagcacatcactaggtgataagtgg 260

                                                                       
Query: 61  ggttgggaagggagaaatatacttctagcttacagactgctgagtttcttattttatggg 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttgggaagggagaaaaatacttctagcttacagactgctgagtttcttattttatggg 320

                                                                       
Query: 121 aactacagatgtaacctaggagcaaggggcaaacaaagcaagtcaccagggccttaagct 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactacagatgtaacctaggggcaaggggcaaacaaagcaagtcaccagggccttaagct 380

                                                                       
Query: 181 ttatttctagtttaaaagagcagtttatctctcaattcatgtgtaagtatgaatgcttag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttctagtttaaaagagcagtttatctctcaattcatgtgtaagtatgaatgcttag 440

                                                                       
Query: 241 tgtttcttcggctataatctgctgagttatggatatttaagaatacagagctttgcatag 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggttcttcggctataatctgctgagttatggatatttaagaatacagagctttgcatag 500

                                                                       
Query: 301 tgattgtatagacatcattgccttttgtgaatttggaagaaatatcacatcattgctaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgattgtatagacatcattgccttttgtgaatttggaagaaatatcacatcattgctaag 560

                                                                       
Query: 361 caattatgcataaactgtacattaattggaaacttttccaattcaaacataaataattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caattatgcataaactgtacattaattggaaacttttccaattcaaacataaataattat 620

                                                       
Query: 421 gatatctctgtgctaattaatccctacacaagaggtgatcttac 464
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatatctctgtgctaattaatccctacacaagaggtgatcttac 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)