NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGG
AATTCTCTGTTCTTGCCATCTATCCATTTATCTATTGCCAATTTTTATTT
TCAATAGTTACAGTTCTTCATGTAGTCCTCATGTTAACTCCTTATTTAAA
GAATAGCTGCCAAACATTTTCTCTCATTTTGCAAGTTCTCCTATTGCTCC
ACCACTGAGAGCTTCTGTCACTGTGCAAATCTTTTTGACTTCCTGCAATC
CTGTTTGTCAATTCTGGAAACATTATTGGTGTTCTACTCAGAAATAATTG
CCTGTTCTTTTATTCCGAATTGTGTTCTCTTAGAAGTTTTAGGTTTTTAA
TTAAGATCCTTAAGTCATTTTGAATTGACTTTTGTTCAGGATGAAAGATG
TGAATATGGTTTCATTCTTTTGCAGATGGCTATCTACATTTGTTGAAAAG
GCTGTTTTGGTTTTAGAGGTTTTTTGTTTGTTTTGTTTTATTTTTCTAGT
GCAAGTTTTTAATGACTTTGTCAAAGATTATGTGTCCATAGCTGTATGGT
TTTATCTCTAGATCCTCTAGTATATTATGTTAGGCTGTGTGTCTCTTTGT
GCCAGTATTGATCTGTCTTTGTCACTATGGATATGTAATATATATTGAAA
TCCGGTACATATTATCACTGGCTGGTTCCCTAAAGCCCACAACTCCCTTT
AATATCTCAGCAACCTTTTGTTGCCCAAACCTTTTATTCGCTTTTTTCTC
CATAATCTCTGTAG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGAGTTCAGGAGTGAGGACATG
GGTAGGCCTTCAGACACCATCCTATATCTAATATATAGCTGTTCTGGGTT
AGGCAGAGGTCAGCTACTGAAGCAGGTTGAATAGCCCCAAATTTTCCTAT
TTATTTGGAACTTCAGAATGGAATCCTATTTGGAAAAGGGATTATAAAAA
TCTGATTGCCTACAGATGTTGAGATACATCTACCTGGATTTTGGATGGGC
CCTAAATCCAATGATTGAGACCTCTTATATATATATATATATACACGTAT
TTATGGGATGCAACTTGATTTTTGTATGTATTCCTGATATGGAGAAACTA
AGACAAACTAAGTAGCATAGCTGTAACCTGAGCTCTTTGTGGTTACTGCT
GTCTCAGTATTTTCCAGTCTTTATGTGAAGAGAGAGGGGCTCCAGGACAC
AGAGACAGGGGAAAAGTTGGATGAATAAAGAAATATGGACTCAGCGATGC
TGATACAAGCCTAGGAGCGCTGAGGACACCAGAGGCTGGAAAGCCCGCAA
TGTTTCCTCCCACAGTTTTTATAGGCGGGGCCCCCCAAAAAACTTTGAGG
GTGGATGGTTGGTCCCCCCAAATTTTTAGGAGACATCCTTGTTTTCGGCC
ACAACCCCAATCTGGTGTGCCCCTCCCCGGGTTCGGCCCGCCACCCTTTA
CCCTCTCTTTTTCTCTTTCCCTCTCTGCCATAATG

Query= MSMg01no412_f20.g1 MSMg01no412_f20.g1 CHROMAT_FILE:
MSMg01no412_f20.g1 PHD_FILE: MSMg01no412_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:42 2005
         (422 letters)



>mm_chr11_16798736_16799557
          Length = 822

 Score =  719 bits (372), Expect = 0.0
 Identities = 407/422 (96%), Gaps = 8/422 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagagttcaggagtgaggacatgggtaggccttcagacaccatcctatatctaatatata 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cagagttcaggagtgaggacgtgggtaggccttcagacaccatcctatatctaatatata 390

                                                                       
Query: 61  gctgttctgggttaggcagaggtcagctactgaagcaggttgaatagccccaaattttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gctgttctgggttaggcagaggtcagctactgaagcaggttgaatagccccaaattttcc 330

                                                                       
Query: 121 tatttatttggaacttcagaatggaatcctatttggaaaagggattataaaaatctgatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tatttatttggaacttcagaatggaatcctatttggaaaagggattataaaaatctgatt 270

                                                                       
Query: 181 gcctacagatgttgagatacatctacctggattttggatgggccctaaatccaatgattg 240
           |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 269 gcctacagatgttgagatacatctacctggattttggatgggccctaagtccagtgattg 210

                                                                       
Query: 241 agacctcttatatatatatatatatacacgtatttatgggatgcaacttgatttttgtat 300
           ||||||||| | | | |     ||||||  ||||||||||||||||||||||||||||||
Sbjct: 209 agacctctttttt-tct-----tataca--tatttatgggatgcaacttgatttttgtat 158

                                                                       
Query: 301 gtattcctgatatggagaaactaagacaaactaagtagcatagctgtaacctgagctctt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 157 gtattcctgatatggagaaactaagacaaactaagtagcatagctgtaacctcagctctt 98

                                                                       
Query: 361 tgtggttactgctgtctcagtattttccagtctttatgtgaagagagaggggctccagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  tgtggttactgctgtctcagtattttccagtctttatgtgaagagagaggggctccagga 38

             
Query: 421 ca 422
           ||
Sbjct: 37  ca 36


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space:   335769
Effective search space used:   335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)