Query= MSMg01no412_p24.b1 MSMg01no412_p24.b1 CHROMAT_FILE:
MSMg01no412_p24.b1 PHD_FILE: MSMg01no412_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:33 2005
(514 letters)
>mm_chr11_33815987_33816899
Length = 913
Score = 899 bits (465), Expect = 0.0
Identities = 498/509 (97%), Gaps = 1/509 (0%)
Strand = Plus / Minus
Query: 6 gaattctatgacagttccttaatgcaagcgaaagggaagagagctgttatgcacacatgc 65
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 713 gaattctacgacagttcattaatgcaagtgaaagggaagagagctgttatgcacacatgc 654
Query: 66 caggccactcaagacttaattgacaagatgtgacatcaaaagcaggtgaagaatgttgca 125
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 caggccactcaagactt-attgacaagatgtgacatcaaaagcaggtgaagaatgttgca 595
Query: 126 atgttggtcagaggcctcatcttctaaggtcagaaggcctcctgctgggtcacaggggca 185
||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 594 atgttgggctgaggcctcatcttctaaggttagaaggcctcctgctgggtcacaggggca 535
Query: 186 cacactaggcttatgaccataactgtagggtccacccctcccactcagtgattctcaatc 245
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cacactaggcttatgaccagaactgtagggtccacccctcccactcagtgattctcaatc 475
Query: 246 ctcatgggactaggaagctctggaaactcaggtgactgcattgcacctcagcactgattc 305
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctcatgggactgggaagctctggaaactcaggtgactgcattgcacctcagcactgattc 415
Query: 306 aggaaatctactggggaggcagagagctccatggcaatatgcacgagtgtgagcatacag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aggaaatctactggggaggcagagagctccatggcaatatgcacgagtgtgagcatacag 355
Query: 366 gtgtgttcacacatgtgcgtgtgagcatacatatatactggaagagttctagaccaggaa 425
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtgtgttcacacctgtgtgtgtgagcatacatatatactggaagagttctagaccaggaa 295
Query: 426 cttgcttccaggtctcacttctacctagacggtcagactagaccaaaaaaagaatattgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cttgcttccaggtctcacttctacctagacggtcagactagaccaaaaaaagaatattgc 235
Query: 486 cacctggctagctccttagaacccacaca 514
|||||||||||||||||||||||||||||
Sbjct: 234 cacctggctagctccttagaacccacaca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space: 455112
Effective search space used: 455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_p24.g1 MSMg01no412_p24.g1 CHROMAT_FILE:
MSMg01no412_p24.g1 PHD_FILE: MSMg01no412_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:33 2005
(420 letters)
>mm_chr11_33619705_33620524
Length = 820
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%)
Strand = Plus / Plus
Query: 1 tctggaatggactgcagctagcctacaccaactcccaaccatgaaaatggttgcccagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctggaatggactgcagctagcctacaccaactcccaaccatgaaaatggttgcccagta 260
Query: 61 atcatctcagaccatgaactatagctacggatgatgccagcagaagatagaagaaaccca 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 atcatctcagaccatgaactatagctatggatgatgccagcagaagatagaagaaaccca 320
Query: 121 gatccctctactcaggaagctactgttgccaaccaacccctgacttcttatgggtgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gatccctctactcaggaagctactgttgccaaccaacccctgacttcttatgggtgagag 380
Query: 181 caataaacttttatatgtccctagatagttttgtcaaggaaggggaggtttcactaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caataaacttttatatgtccctagatagttttgtcaaggaaggggaggtttcactaggca 440
Query: 241 cagctaacctttatccacctgagtcgcttaggcaagaaggcgatctgacccacagatagg 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 cagctaacctttatccacctgagttgcttaggcaagaaggcgatctgacccacagatagg 500
Query: 301 agtcctctgccgagacacgcccactggcttcctgattagtgtgactgggggcctgaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtcctctgccgagacacgcccactggcttcctgattagtgtgactgggggcctgaggca 560
Query: 361 ggaaggatggaaagggccacaggtgagattcaaccagggggatgtgtgatcttggagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaaggatggaaagggccacaggtgagattcaaccagggggatgtgtgatcttggagcct 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
