XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAATTCTC
CCCAGTCTTCCACCCCACATCAGCTGTATATTTCCATTCATTCTCCTGAC
CCTTGGGCTTCTCTCCTGACTCCACCCACAATGGATCCTGCCCCTTTCCC
CCTCTGCTCGTTCACCCTGGTCCCTCCCTACCTCTGCCTCCCATGATTAT
TTTGTTCCTCCTTCTAGGTGAGATTGAAACATCCTCACTTGGATCTTCCC
TCTTGTTAAACCTCTTACTGTCTGTGAGACAATTTTTCTTTTATTCATTC
TGGCCTTAACTGTAATTATTTACATTTTCTTCCACAAAATACTATTTTTC
AATGTCTCCATAGAGCAGTAAGAAATAAACATTAGATTCAGGTAATGTAT
TAAATATTGGATGACATCAAAAACTCTATGTGGTGGCATGATATTCTTGG
GGGGAGGCATTTTCCTATATGTTAACATATACTCTGAGAAATCTCTAAAA
TCCTGCACAAAATAAAAAATAATTGCTAAACAAAGTAGCTATGCACACAG
AAAATGCTTCAAAATTTATTTTCTGAACTATATGCTGTGAGTTTACATTA
TGGCTTTAAACACCGCTTCAGAGCATCTTTGTAATACAATTCAAGAACTC
TTAGTTTATTTTATACTAAAAATCGTTTCTAAATCAAAGCATCCCCTGTT
TACTTTAATTATCTATTTTATGCCCATTCA

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGGTGAATGAAAGATTTTGTTGGCTGAAGAT
GCCAGTCAGCAACAATCGTGGTATATTTATTTTTCAATGCTTAAAAAAAG
CTGGAGCATGGCTCTTTTGTAGAAATATGCATATGCCTAAAAAGGCTTTT
TAAGTGCTCGATCAGGAAATCCAGCTTTCCAATACTCACTTTTCACAGGG
TTCGTGACATTCAGGTTTTAAAACTGAGATTCTAGAGCACCATGACAACT
AGCTTTCCAGATCCTTTGTTTTTAAACAAGTTAGCATCCTGATAGGATCA
CTGCACATAGTAGGCCTTTCACAGGTTGGTTTTGAGAGTGATAATCATAC
CCAGAAAGCAGTTTTCTTTTCTTTTTAAATTCATTTGTCACTTTCTGTGA
AAAACAAAACAAAGGAAACAAAGAAACCAAAAACAACATATAAAAATAAA
CCACAAACCCCCTCCCCACCCAAACCCTTATCTTTTCAGTTCAACTAACA
GAACCCAAATAGCTTTTTAAAAACCCACAACCCAATTCTTAATCCCCTTT
TAAAAGGAAGAGATTAAAGATTTTAACATGGGTACCCTTGCCCATGGTAT
TGCTTTTTCCGCTCAAACCCTCTTTTTTTTTATGGGTAAGCGACACCTTT
TTATCTGCCTGCTGCTTATTTCTCCTTATCNCCCTTATCCTCTTCC

Query= MSMg01no413_i05.b1 MSMg01no413_i05.b1 CHROMAT_FILE:
MSMg01no413_i05.b1 PHD_FILE: MSMg01no413_i05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:13 2005
         (486 letters)



>mm_chr11_41265022_41265904
          Length = 883

 Score =  791 bits (409), Expect = 0.0
 Identities = 434/443 (97%), Gaps = 3/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 44  tatttccattcattctcctgacccttgggcttctctcctgactccacccacaatggatcc 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 tatttccattcattctcctgacccttgggcttctctcctgactccacccacaatggatcc 824

                                                                       
Query: 104 tgcccctttccccctctgctcgttcaccctggtccctccctacctctgcctcccatgatt 163
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tgcccctttccccctctgcttgttcaccctggtccctccctacctctgcctcccatgatt 764

                                                                       
Query: 164 attttgttcctccttctaggtgagattgaaacatcctcacttggatcttccctcttgtta 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 attttgttcctccttctaggtgagattgaaacatcctcacttggatcttccctcttgtta 704

                                                                       
Query: 224 aacctcttactgtctgtgagacaatttttcttttattcattctggccttaactgtaatta 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 703 aacctcttactgtctgtgagacaatttttcttttattcattctggccttaactgtaaata 644

                                                                       
Query: 284 tttacattttcttccacaaaatactatttttcaatgtctccatagagcagtaagaaataa 343
             |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 643 aatacattt--ttccacaaaatactatttttcaatgtctacatagagcagtaagaaataa 586

                                                                       
Query: 344 acattagattcaggtaatgtattaaatattggatgacatcaaaaactctatgtggtggca 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acattagattcaggtaatgtattaaatattggatgacatcaaaaactctatgtggtggca 526

                                                                       
Query: 404 tgatattcttggggggaggcattttcctatatgttaacatatactctgagaaatctctaa 463
           |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgatattctt-ggggaaggcattttcctatatgttaacatatactctgagaaatctctaa 467

                                  
Query: 464 aatcctgcacaaaataaaaaata 486
           |||||||||||||||||||||||
Sbjct: 466 aatcctgcacaaaataaaaaata 444


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 883
Length adjustment: 10
Effective length of query: 476
Effective length of database: 873
Effective search space:   415548
Effective search space used:   415548
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)