Query= MSMg01no413_l02.b1 MSMg01no413_l02.b1 CHROMAT_FILE:
MSMg01no413_l02.b1 PHD_FILE: MSMg01no413_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:27 2005
(622 letters)
>mm_chr11_36599630_36600651
Length = 1022
Score = 820 bits (424), Expect = 0.0
Identities = 454/464 (97%), Gaps = 2/464 (0%)
Strand = Plus / Minus
Query: 160 gttcttttactggcttttgctgtttttgtttgcttgcttgctttgttgttgtctttgatt 219
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gttcttttactggcttttgttgtttttgtttgcttgcttgctttgttgttgtctttgatt 963
Query: 220 tcttgaaacaggatctcatgatgtagccctggctatctggagctcactatgtagatctgg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 tcttgaaacaggatctcatgatgtagccctggctatctggagctcactatgtagatctgg 903
Query: 280 ctggcttccaact-cacagagatgtgcctgcctcggtctcccacatgccaggattcaaag 338
||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ctggcctccaa-tgcacagagatgtgcctgcctcggtctcccacatgccaggattcaaag 844
Query: 339 catgtttctccatgcctgtctacattgtctattttgaataatgttactcataaacacaaa 398
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 843 catgtttctccatgcctgtctacattttctattttgaataatgttactcataaacacaaa 784
Query: 399 catctctctcctctaaatgatatgcaaagtaatgttattttctcactttgttattctata 458
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 783 catctctctcctccaaatgatatgcaaagtaatgttactttctcactttgttattctata 724
Query: 459 ttaaatgtgactctttataatcgttcaatcttaattaaattattttctcatatactttac 518
||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 723 ttaaatgtgactcttcataatcgttcaatcttaattaaattgttctctcatatactttac 664
Query: 519 cagaaaagttgaatctcaagtcagataaaagtaggagttgttagatttcttttttattta 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagaaaagttgaatctcaagtcagataaaagtaggagttgttagatttcttttttattta 604
Query: 579 aatctgaaaattggatgatttggatgatagactgagtactcatc 622
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aatctgaaaattggatgatttggatgatagactgagtactcatc 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_l02.g1 MSMg01no413_l02.g1 CHROMAT_FILE:
MSMg01no413_l02.g1 PHD_FILE: MSMg01no413_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:27 2005
(547 letters)
>mm_chr11_36445829_36446775
Length = 947
Score = 1058 bits (547), Expect = 0.0
Identities = 547/547 (100%)
Strand = Plus / Plus
Query: 1 tcaggaaggaccacaagtgttaccatacttaagtgtccctttacagatgaggaaagatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaggaaggaccacaagtgttaccatacttaagtgtccctttacagatgaggaaagatta 260
Query: 61 gttgtgcttcatttagtactctgcttacagctagtaagtaggagcaagttgatctagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtgcttcatttagtactctgcttacagctagtaagtaggagcaagttgatctagcca 320
Query: 121 aactggttctaattcaagagaccatggtgttaacacctgctgtaattagattccgtgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactggttctaattcaagagaccatggtgttaacacctgctgtaattagattccgtgctc 380
Query: 181 ctccagattcaacttcaacaaatgagagaccagggttcacgaaactcgaagtctcttcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccagattcaacttcaacaaatgagagaccagggttcacgaaactcgaagtctcttcta 440
Query: 241 aagacagggtgctggtttctaacaaggactagaactggatatttttggtagttaatgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagacagggtgctggtttctaacaaggactagaactggatatttttggtagttaatgagg 500
Query: 301 aaaggtcaacactgtatcatataatgctcctagttaatgagatgaaggtgttagtgacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaggtcaacactgtatcatataatgctcctagttaatgagatgaaggtgttagtgacat 560
Query: 361 tggaaatggtatgaaaccccttctataccaattatcactgacagtgcttattgatgtata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggaaatggtatgaaaccccttctataccaattatcactgacagtgcttattgatgtata 620
Query: 421 atgttaaagcaaattgagctatatcttgagtaatttcacaatggaccagtaaaataaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgttaaagcaaattgagctatatcttgagtaatttcacaatggaccagtaaaataaaac 680
Query: 481 caagccaaacaaataaaaattagactcccagagtctctcggatatctagaaactcacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagccaaacaaataaaaattagactcccagagtctctcggatatctagaaactcacaaa 740
Query: 541 tatatgg 547
|||||||
Sbjct: 741 tatatgg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
