Query= MSMg01no414_g12.b1 MSMg01no414_g12.b1 CHROMAT_FILE:
MSMg01no414_g12.b1 PHD_FILE: MSMg01no414_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:26 2005
(509 letters)
>mm_chr11_42567278_42568187
Length = 910
Score = 893 bits (462), Expect = 0.0
Identities = 498/510 (97%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 1 aggaaatacatcagaagagtattacaaatccagaaattatctttccagagaagaaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 aggaaatacatcagaagagtattacaaatccagaaattatctttccagagaagaaaacat 761
Query: 61 gctatacaaagaccctaagtcaatacagtttctcatgttgtggtgacccccaaccataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 760 gctatacaaagaccctaagtcaatacagtttctcatgttgtggtgacccccaatcataaa 701
Query: 121 attatttaatttctacttcctaactatacttttgctactgtcataaatcataatgtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 attatttaatttctacttcctaactatacttttgctactgtcataaatcataatgtaaat 641
Query: 181 atctgatattcaggatatcttatatgcaaccagcaaaggggtttaaaaacactgtcctag 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 atctgatattcagaatatcttatatgcaaccagcaaaggggtttaaaaacactgtcctag 581
Query: 241 gtgaggtctgtgtatcataagctaagtgtattcaagaagcatccatgagcataagcagag 300
|||||| ||| | ||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct: 580 gtgaggcctgagaatcataacctaagtgtattcaagaaacatccatgagcataaggagag 521
Query: 301 ttcacaccagaacacctgcaagatctc-aagtgatgcattctcagctgaagcatgggaat 359
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 520 ttcacaccagaacacctgaaagatctccaagtgatgcattctcagctgaagcatgggaat 461
Query: 360 tgttttaattaaagatctaaagatataactcttttcttctccttcatccattcatttatt 419
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 460 tgttttaattaaagatctgaagatataactcttttcttctacttcatccattcatttatt 401
Query: 420 cactaagtatgtattgagtggttacccaatgcaaagctgtgataggcactggggatatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cactaagtatgtattgagtggttacccaatgcaaagctgtgataggcactggggatatca 341
Query: 480 cctaaaacacttcttttctatgtcctcaca 509
||||||||||||||||||||||||||||||
Sbjct: 340 cctaaaacacttcttttctatgtcctcaca 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 910
Length adjustment: 10
Effective length of query: 499
Effective length of database: 900
Effective search space: 449100
Effective search space used: 449100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_g12.g1 MSMg01no414_g12.g1 CHROMAT_FILE:
MSMg01no414_g12.g1 PHD_FILE: MSMg01no414_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:26 2005
(521 letters)
>mm_chr11_42418891_42419812
Length = 922
Score = 980 bits (507), Expect = 0.0
Identities = 518/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 ttgttggacatagcaggaaggaacccttcaagtgatttagatgtgcactacaaataagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgttggacatagcaggaaggaacccttcaagtgatttagatgtgcactacaaataagtg 260
Query: 61 atggcaatcccctattaaaactctatgcagcaaactatagatccacttcaataatgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcaatcccctattaaaactctatgcagcaaactatagatccacttcaataatgaaaa 320
Query: 121 tcaatggcagagaataagcattgaatagcaaagactgttcataaagctttagcatttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaatggcagagaataagcattgaatagcaaagactgttcataaagctttagcatttatt 380
Query: 181 cttggctataaatgaaaaataacttaaactggagattaattagatctccaaatgaagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttggctataaatgaaaaataacttaaactggagattaattagatctccaaatgaagtaa 440
Query: 241 agatttgtatatcatctgcaatttataaacaaatatcagccctgtcaagctattggagtt 300
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agatttggagatcatctgcaatttataaacaaatatcagccctgtcaagctattggagtt 500
Query: 301 ataatggtacacacataataggaataattgctttctcattcttacttatacatgcattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatggtacacacataataggaataattgctttctcattcttacttatacatgcattta 560
Query: 361 tcaatgggtgaatattttt-gcagtatttattttatatttatagaatttcagattctaga 419
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaatgggtgaatattttttgcagtatttattttatatttatagaatttcagattctaga 620
Query: 420 aaatgaggtaaagtttctatcatcaaaagggaatttttcctgagaaaactctggattaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatgaggtaaagtttctatcatcaaaagggaatttttcctgagaaaactctggattaga 680
Query: 480 anatatttattaaataaaagagaggaaagaaagtgttttttc 521
| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatatttattaaataaaagagaggaaagaaagtgttttttc 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
