Query= MSMg01no415_k12.b1 MSMg01no415_k12.b1 CHROMAT_FILE:
MSMg01no415_k12.b1 PHD_FILE: MSMg01no415_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:06 2005
(244 letters)
>mm_chr11_48508578_48509220
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 tttacacttctgtgtctccttatctgtgccataaggatgaaggtgatgcacccactatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacacttctgtgtctccttatctgtgccataaggatgaaggtgatgcacccactatgg 260
Query: 61 gcctgaagatttcctcattctgcacagacttggccatgtttgcatgcttgtatgtttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgaagatttcctcattctgcacagacttggccatgtttgcatgcttgtatgtttgca 320
Query: 121 gtcactaagccacttctcccatccttagagggaaaggagctactaagactggctgttctc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtca-taagccacttctcccatccttagagggaaaggagctactaagactggctgttctc 379
Query: 181 taacatttctaatagatacctgactcaagctcagccaatcagaggcagtcctacgaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taacatttctaatagatacctgactcaagctcagccaatcagaggcagtcctacgaattt 439
Query: 241 gaa 243
|||
Sbjct: 440 gaa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_k12.g1 MSMg01no415_k12.g1 CHROMAT_FILE:
MSMg01no415_k12.g1 PHD_FILE: MSMg01no415_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:06 2005
(148 letters)
>mm_chr11_48683035_48683582
Length = 548
Score = 279 bits (144), Expect = 7e-80
Identities = 147/148 (99%)
Strand = Plus / Minus
Query: 1 ggtgtgcaggcaggtgggaagtctccatctacagtcacagctacataaatagttctgaga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 348 ggtgtgcaggcaggtgggaagtctccatctacagtcacagttacataaatagttctgaga 289
Query: 61 aagcatggtttgctctcatcttctactctggtgagtggaactcagttaagtaaaaccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aagcatggtttgctctcatcttctactctggtgagtggaactcagttaagtaaaaccaat 229
Query: 121 acagaactagaccctggctaatgatagg 148
||||||||||||||||||||||||||||
Sbjct: 228 acagaactagaccctggctaatgatagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 548
Length adjustment: 8
Effective length of query: 140
Effective length of database: 540
Effective search space: 75600
Effective search space used: 75600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
